RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU4-39P-201ENST00000362455 PIK3C2AO00443 1686 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 NSD2O96028 1365 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 KTN1Q86UP2 1357 aaKnown RBP6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 A0A0B4J269 797 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 A0A0G2JLL6 359 aaPredicted RBP6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 GAGE12BA1L429 117 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 GAGE12HA6NDE8 117 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 RNASET2O00584 256 aaKnown RBP6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 FAM20BO75063 409 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 CSF1RP07333 972 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 NPPBP16860 134 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 SELENOPP49908 381 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 POU5F1BQ06416 359 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 NSUN2Q08J23 767 aaKnown RBP eCLIP6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 TUBB3Q13509 450 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 E2F2Q14209 437 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 SPDYE7PQ495Y7 208 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 SFRP4Q6FHJ7 346 aaPredicted RBP6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 MZT2AQ6P582 158 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 GATAD2AQ86YP4 633 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 SUGP1Q8IWZ8 645 aaKnown RBP6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 SLC15A3Q8IY34 581 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 STT3BQ8TCJ2 826 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 TMEM171Q8WVE6 324 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 EID2BQ96D98 161 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 LOXL4Q96JB6 756 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 FAM227BQ96M60 508 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 BDH2Q9BUT1 245 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 KATNAL1Q9BW62 490 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 ALOXE3Q9BYJ1 711 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 ITM2CQ9NQX7 267 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 SERTAD3Q9UJW9 196 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 SSX2IPQ9Y2D8 614 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 DTNAQ9Y4J8 743 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 NOX1Q9Y5S8 564 aa6.49□□□□□ -1.37
RNU4-39P-201ENST00000362455 PAPPAQ13219 1627 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 IPO5O00410 1097 aaKnown RBP6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 CD3EAPO15446 510 aaKnown RBP6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 TRIAP1O43715 76 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 SH3BP5O60239 455 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 ARP10275 920 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 HGFP14210 728 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 GATA3P23771 443 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 RESTQ13127 1097 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 PRKD1Q15139 912 aaPredicted RBP6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 TIGD6Q17RP2 521 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 ICE2Q659A1 982 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 SULT6B1Q6IMI4 303 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 SMIM5Q71RC9 77 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 TMPRSS6Q8IU80 811 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 GALNT15Q8N3T1 639 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 FAM109AQ8N4B1 249 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 IP6K1Q92551 441 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 BOD1Q96IK1 185 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 OSBPL9Q96SU4 736 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 GALNT9Q9HCQ5 603 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 CASS4Q9NQ75 786 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 TMOD4Q9NZQ9 345 aa6.48□□□□□ -1.37
RNU4-39P-201ENST00000362455 ITSN1Q15811 1721 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 PCDH17O14917 1159 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 USP1O94782 785 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 GLP2RO95838 553 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 HOXA5P20719 270 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 ADORA2AP29274 412 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 SLC5A2P31639 672 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 VAV2P52735 878 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 GPS1Q13098 491 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 TAF5Q15542 800 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 BEAN1Q3B7T3 259 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 ALFQ53S48 1182 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 CERCAMQ5T4B2 595 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 SP5Q6BEB4 398 aaPredicted RBP6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 TANGO2Q6ICL3 276 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 ANKRD18AQ8IVF6 992 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 ZNF668Q96K58 619 aaPredicted RBP6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 TMEM74BQ9NUR3 256 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 AURKAIP1Q9NWT8 199 aaPredicted RBP6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 C9orf78Q9NZ63 289 aaPredicted RBP6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 TFCP2L1Q9NZI6 479 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 DNAJB11Q9UBS4 358 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 VPS51Q9UID3 782 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 CA14Q9ULX7 337 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 HS3ST4Q9Y661 456 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 TRPM1Q7Z4N2 1603 aa6.47□□□□□ -1.37
RNU4-39P-201ENST00000362455 RGPD3A6NKT7 1758 aaPredicted RBP6.46□□□□□ -1.37
RNU4-39P-201ENST00000362455 RGPD4Q7Z3J3 1758 aa6.46□□□□□ -1.37
RNU4-39P-201ENST00000362455 TRGV11A0A075B6L2 103 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 FCHO1O14526 889 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 CCNT2O60583 730 aaKnown RBP6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 NDUFA10O95299 355 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 ITGA2BP08514 1039 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 SRGAP2BP0DMP2 458 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 NTSR1P30989 418 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 MAPK9P45984 424 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 PDE6CP51160 858 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 PGDP52209 483 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 ARL4CP56559 192 aa6.46□□□□□ -1.38
RNU4-39P-201ENST00000362455 CCNIQ14094 377 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms