RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 VPS28Q9UK41 221 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SLC39A10Q9ULF5 831 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 VANGL2Q9ULK5 521 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 EIF3LQ9Y262 564 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 GIT1Q9Y2X7 761 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 BTNL10A8MVZ5 291 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 TRDMT1O14717 391 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 LZTS3O60299 673 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SNHG28P0DPA3 235 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 KLRC2P26717 231 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 DEFB115Q30KQ5 88 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 LRRC38Q5VT99 294 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SLC26A11Q86WA9 606 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 TRIM48Q8IWZ4 208 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 KATNAL2Q8IYT4 538 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 CARNMT1Q8N4J0 409 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF555Q8NEP9 628 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 LENG9Q96B70 501 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 THOC1Q96FV9 657 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 MAGEB18Q96M61 343 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 OLFM3Q96PB7 478 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SMIM35A0A1B0GVV1 85 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 KANSL1LA0AUZ9 987 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SIGLEC16A6NMB1 481 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PQBP1O60828 265 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 FKTNO75072 461 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PPM1AP35813 382 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 RAP1GAPP47736 663 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 RHOAP61586 193 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PRKCQQ04759 706 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ADIGQ0VDE8 80 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 NFIL3Q16649 462 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 GRTP1Q5TC63 336 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SCARA3Q6AZY7 606 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 KDM7AQ6ZMT4 941 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 TRPM8Q7Z2W7 1104 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 DUSP9Q99956 384 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF556Q9HAH1 456 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 RAD18Q9NS91 495 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 APPL1Q9UKG1 709 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 RNF112Q9ULX5 631 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PEAK1Q9H792 1746 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 CNTNAP2Q9UHC6 1331 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 RECQL4O94761 1208 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 GRK3P35626 688 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 MAPK8P45983 427 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ALDH18A1P54886 795 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 TBX2Q13207 712 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 CCDC153Q494R4 210 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 DDX42Q86XP3 938 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 NKX2-3Q8TAU0 364 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SH3GL1Q99961 368 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 WWOXQ9NZC7 414 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SNCAIPQ9Y6H5 919 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 MYH6P13533 1939 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 TCHHQ07283 1943 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 HNRNPCL2B2RXH8 293 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 GHRP10912 638 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 CRABP2P29373 138 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PMS1P54277 932 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 AIF1P55008 147 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PRMT2P55345 433 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 TGM3Q08188 693 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ITIH4Q14624 930 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PAN2Q504Q3 1202 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 DENND5BQ6ZUT9 1274 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ILDR1Q86SU0 546 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PARP9Q8IXQ6 854 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 HIPK4Q8NE63 616 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 TATDN2Q93075 761 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 SEC16BQ96JE7 1060 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ASB2Q96Q27 587 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ACO2Q99798 780 aaKnown RBP5.01□□□□□ -1.61
SCN3A-202ENST00000360093 BLOC1S6Q9UL45 172 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 ANKRD6Q9Y2G4 727 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 TRIM17Q9Y577 477 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 CAPN6Q9Y6Q1 641 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 PLIN4Q96Q06 1357 aa5.01□□□□□ -1.61
SCN3A-202ENST00000360093 C16orf96A6NNT2 1141 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 APOC4-APOC2K7ER74 178 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 SNUPNO95149 360 aaKnown RBP5□□□□□ -1.61
SCN3A-202ENST00000360093 FGF19O95750 216 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 POMCP01189 267 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 APOC2P02655 101 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 DENND1BQ6P3S1 775 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 TAGAPQ8N103 731 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 C4orf33Q8N1A6 199 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 FBXO36Q8NEA4 188 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 ZNF333Q96JL9 665 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 NCKIPSDQ9NZQ3 722 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 CHD4Q14839 1912 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 NID2Q14112 1375 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 TRIM49D1C9J1S8 452 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 GLRA2P23416 452 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 OR1E1P30953 314 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 PPP3CCP48454 512 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 HPCAP84074 193 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 SKOR1P84550 965 aa5□□□□□ -1.61
SCN3A-202ENST00000360093 OCA2Q04671 838 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms