RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 SLC9A1P19634 815 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 NFKB1P19838 968 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 S1PR1P21453 382 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 POLGP54098 1239 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC12A2P55011 1212 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 FAM3BP58499 235 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 RELQ04864 619 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 TBC1D8BQ0IIM8 1120 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 SMAD4Q13485 552 aaKnown RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 BCL2A1Q16548 175 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 PCSK7Q16549 785 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 ZNF766Q5HY98 468 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 CT47A1Q5JQC4 288 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 PRAMEF13Q5VWM6 474 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 PLEKHA7Q6IQ23 1121 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 BMP8AQ7Z5Y6 402 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 SPATA2LQ8IUW3 424 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC15A4Q8N697 577 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 PDILTQ8N807 584 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 SNX33Q8WV41 574 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 KRT35Q92764 455 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 TTPALQ9BTX7 342 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 PDZD7Q9H5P4 517 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 DNAJB12Q9NXW2 375 aaKnown RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 TRPM5Q9NZQ8 1165 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 ACTL7BQ9Y614 415 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 RGSL1A5PLK6 1076 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 YDJCA8MPS7 323 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 H0Y3Z8 333 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 EDIL3O43854 480 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 MT-ND5P03915 603 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 IQCF3P0C7M6 154 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 XRCC6P12956 609 aaKnown RBP eCLIP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 ITGAXP20702 1163 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 NDUFV1P49821 464 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 MUM1L1Q5H9M0 696 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 TRIM68Q6AZZ1 485 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 LCN10Q6JVE6 187 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 NOTUMQ6P988 496 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 CRELD2Q6UXH1 353 aaPredicted RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 RSRC2Q7L4I2 434 aaKnown RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 TMEM110Q86TL2 294 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 SERINC5Q86VE9 423 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 VSIG1Q86XK7 387 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 ANKRD35Q8N283 1001 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 FBXL6Q8N531 539 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 SNAPC3Q92966 411 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 CCDC47Q96A33 483 aaKnown RBP2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 P2RY11Q96G91 374 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLF1Q9BQI6 1058 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 AKT3Q9Y243 479 aa2.06□□□□□ -2.08
SMARCAD1-202ENST00000359052 PABPN1LA6NDY0 278 aaKnown RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 SEPT4O43236 478 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 CORO7P57737 925 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 GPC5P78333 572 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 IKZF1Q13422 519 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 MAPKAPK3Q16644 382 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 RNASE8Q8TDE3 154 aaKnown RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 UIMC1Q96RL1 719 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 PHF20Q9BVI0 1012 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 TRIM5Q9C035 493 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 ETAA1Q9NY74 926 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 RBPJLQ9UBG7 517 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC39A10Q9ULF5 831 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 BRD4O60885 1362 aaPredicted RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 NUP155O75694 1391 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 TMEM2Q9UHN6 1383 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 SMPD2O60906 423 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 PLS3P13797 630 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 MTHFRP42898 656 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 NPTX2P47972 431 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 ZNF750Q32MQ0 723 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 PABPC1LQ4VXU2 614 aaKnown RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 CCDC38Q502W7 563 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 CEP55Q53EZ4 464 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 ARHGAP15Q53QZ3 475 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 IQSEC1Q6DN90 963 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 C1QL4Q86Z23 238 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 LINC00116Q8NCU8 138 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 AZIN2Q96A70 460 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 SIPA1Q96FS4 1042 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 ZBTB1Q9Y2K1 713 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 SZT2Q5T011 3432 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 KIF26AQ9ULI4 1882 aaPredicted RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 CLEC18AA5D8T8 446 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 TRIM64BA6NI03 449 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 F8W031 263 aaPredicted RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 CLIC2O15247 247 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 TGDSO95455 350 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 KIR2DL1P43626 348 aaPredicted RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 YPEL5P62699 121 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 ICA1Q05084 483 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 ZP2Q05996 745 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 PRPF4BQ13523 1007 aaKnown RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 ZIK1Q3SY52 487 aaPredicted RBP2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 GNPTABQ3T906 1256 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 B4GALNT4Q76KP1 1039 aa2.05□□□□□ -2.08
SMARCAD1-202ENST00000359052 ADGRG6Q86SQ4 1221 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms