RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SMYD2Q9NRG4 433 aa18.44■□□□□ 0.54
APP-202ENST00000348990 CDH22Q9UJ99 828 aa18.44■□□□□ 0.54
APP-202ENST00000348990 TTLL3Q9Y4R7 772 aa18.44■□□□□ 0.54
APP-202ENST00000348990 C3orf70A6NLC5 250 aaPredicted RBP18.44■□□□□ 0.54
APP-202ENST00000348990 PRPSAP2O60256 369 aa18.44■□□□□ 0.54
APP-202ENST00000348990 SIN3BO75182 1162 aa18.44■□□□□ 0.54
APP-202ENST00000348990 DGKIO75912 1065 aa18.44■□□□□ 0.54
APP-202ENST00000348990 RAD17O75943 681 aa18.44■□□□□ 0.54
APP-202ENST00000348990 LSM8O95777 96 aaKnown RBP18.44■□□□□ 0.54
APP-202ENST00000348990 APOEP02649 317 aa18.44■□□□□ 0.54
APP-202ENST00000348990 PDPK2PQ6A1A2 396 aa18.44■□□□□ 0.54
APP-202ENST00000348990 UNC5BQ8IZJ1 945 aa18.44■□□□□ 0.54
APP-202ENST00000348990 ARHGAP28Q9P2N2 729 aa18.44■□□□□ 0.54
APP-202ENST00000348990 POMPQ9Y244 141 aa18.44■□□□□ 0.54
APP-202ENST00000348990 ADAMTSL1Q8N6G6 1762 aa18.44■□□□□ 0.54
APP-202ENST00000348990 ZNF536O15090 1300 aa18.44■□□□□ 0.54
APP-202ENST00000348990 DKC1O60832 514 aaKnown RBP eCLIP18.44■□□□□ 0.541e-7■■■■□ 19.3
APP-202ENST00000348990 MAP3K10Q02779 954 aa18.44■□□□□ 0.54
APP-202ENST00000348990 PRKG1Q13976 671 aa18.44■□□□□ 0.54
APP-202ENST00000348990 OR6B2Q6IFH4 312 aa18.44■□□□□ 0.54
APP-202ENST00000348990 RAB3IL1Q8TBN0 382 aa18.44■□□□□ 0.54
APP-202ENST00000348990 SLC7A3Q8WY07 619 aa18.44■□□□□ 0.54
APP-202ENST00000348990 SIRPGQ9P1W8 387 aa18.44■□□□□ 0.54
APP-202ENST00000348990 PAK5Q9P286 719 aa18.44■□□□□ 0.54
APP-202ENST00000348990 NR3C2P08235 984 aa18.43■□□□□ 0.54
APP-202ENST00000348990 PABPC4LP0CB38 370 aaKnown RBP18.43■□□□□ 0.54
APP-202ENST00000348990 SRGAP2CP0DJJ0 459 aa18.43■□□□□ 0.54
APP-202ENST00000348990 SH3BGRP55822 239 aaPredicted RBP18.43■□□□□ 0.54
APP-202ENST00000348990 YWHAEP62258 255 aaKnown RBP18.43■□□□□ 0.54
APP-202ENST00000348990 WASHC5Q12768 1159 aa18.43■□□□□ 0.54
APP-202ENST00000348990 MSLNQ13421 630 aaPredicted RBP18.43■□□□□ 0.54
APP-202ENST00000348990 CCNIQ14094 377 aa18.43■□□□□ 0.54
APP-202ENST00000348990 ANKRD20A4Q4UJ75 823 aa18.43■□□□□ 0.54
APP-202ENST00000348990 ITFG2Q969R8 447 aa18.43■□□□□ 0.54
APP-202ENST00000348990 PRPF18Q99633 342 aaKnown RBP18.43■□□□□ 0.54
APP-202ENST00000348990 AK5Q9Y6K8 562 aa18.43■□□□□ 0.54
APP-202ENST00000348990 ZNFX1Q9P2E3 1918 aaKnown RBP18.43■□□□□ 0.54
APP-202ENST00000348990 TFDP2Q14188 446 aa18.43■□□□□ 0.54
APP-202ENST00000348990 CYTH1Q15438 398 aa18.43■□□□□ 0.54
APP-202ENST00000348990 C15orf59Q2T9L4 293 aaPredicted RBP18.43■□□□□ 0.54
APP-202ENST00000348990 UNC5AQ6ZN44 842 aa18.43■□□□□ 0.54
APP-202ENST00000348990 UBA3Q8TBC4 463 aa18.43■□□□□ 0.54
APP-202ENST00000348990 AZIN2Q96A70 460 aa18.43■□□□□ 0.54
APP-202ENST00000348990 CMTM5Q96DZ9 223 aa18.43■□□□□ 0.54
APP-202ENST00000348990 PHF12Q96QT6 1004 aa18.43■□□□□ 0.54
APP-202ENST00000348990 CPXM1Q96SM3 734 aa18.43■□□□□ 0.54
APP-202ENST00000348990 Q9H521 79 aa18.43■□□□□ 0.54
APP-202ENST00000348990 DNAJB4Q9UDY4 337 aa18.43■□□□□ 0.54
APP-202ENST00000348990 COL5A3P25940 1745 aaPredicted RBP18.43■□□□□ 0.54
APP-202ENST00000348990 SDR42E2A6NKP2 422 aa18.42■□□□□ 0.54
APP-202ENST00000348990 ALDH1A3P47895 512 aa18.42■□□□□ 0.54
APP-202ENST00000348990 RAB6CQ53S08 254 aa18.42■□□□□ 0.54
APP-202ENST00000348990 KYAT3Q6YP21 454 aaKnown RBP18.42■□□□□ 0.54
APP-202ENST00000348990 RNF111Q6ZNA4 994 aa18.42■□□□□ 0.54
APP-202ENST00000348990 SH2D5Q6ZV89 423 aa18.42■□□□□ 0.54
APP-202ENST00000348990 LENG1Q96BZ8 264 aaPredicted RBP18.42■□□□□ 0.54
APP-202ENST00000348990 DGCR14Q96DF8 476 aaKnown RBP18.42■□□□□ 0.54
APP-202ENST00000348990 RAB6CQ9H0N0 254 aa18.42■□□□□ 0.54
APP-202ENST00000348990 JPH1Q9HDC5 661 aaPredicted RBP18.42■□□□□ 0.54
APP-202ENST00000348990 PXMP2Q9NR77 195 aa18.42■□□□□ 0.54
APP-202ENST00000348990 MAGED2Q9UNF1 606 aaPredicted RBP18.42■□□□□ 0.54
APP-202ENST00000348990 GOLGA8QA0A0J9YX86 632 aa18.42■□□□□ 0.54
APP-202ENST00000348990 GOLGA8OA6NCC3 632 aa18.42■□□□□ 0.54
APP-202ENST00000348990 GOLGA8NF8WBI6 632 aa18.42■□□□□ 0.54
APP-202ENST00000348990 H0YIN7 160 aa18.42■□□□□ 0.54
APP-202ENST00000348990 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
APP-202ENST00000348990 NEMP1O14524 444 aa18.42■□□□□ 0.54
APP-202ENST00000348990 ITGA2BP08514 1039 aa18.42■□□□□ 0.54
APP-202ENST00000348990 SERPINB5P36952 375 aa18.42■□□□□ 0.54
APP-202ENST00000348990 GMPRP36959 345 aa18.42■□□□□ 0.54
APP-202ENST00000348990 MPP5Q8N3R9 675 aa18.42■□□□□ 0.54
APP-202ENST00000348990 PGBD4Q96DM1 585 aa18.42■□□□□ 0.54
APP-202ENST00000348990 LZTS1Q9Y250 596 aa18.42■□□□□ 0.54
APP-202ENST00000348990 PDGFRAP16234 1089 aa18.42■□□□□ 0.54
APP-202ENST00000348990 EIF4BP23588 611 aaKnown RBP18.42■□□□□ 0.54
APP-202ENST00000348990 SESN2P58004 480 aaPredicted RBP18.42■□□□□ 0.54
APP-202ENST00000348990 ASNSD1Q9NWL6 643 aa18.42■□□□□ 0.54
APP-202ENST00000348990 SMIM31A0A1B0GVY4 71 aa18.41■□□□□ 0.54
APP-202ENST00000348990 M0QYV0 167 aa18.41■□□□□ 0.54
APP-202ENST00000348990 TCN1P20061 433 aaPredicted RBP18.41■□□□□ 0.54
APP-202ENST00000348990 PTPN7P35236 360 aa18.41■□□□□ 0.54
APP-202ENST00000348990 CPOXP36551 454 aa18.41■□□□□ 0.54
APP-202ENST00000348990 INHBCP55103 352 aa18.41■□□□□ 0.54
APP-202ENST00000348990 ACTR2P61160 394 aa18.41■□□□□ 0.54
APP-202ENST00000348990 MRPS22P82650 360 aaKnown RBP18.41■□□□□ 0.54
APP-202ENST00000348990 DUOXA2Q1HG44 320 aa18.41■□□□□ 0.54
APP-202ENST00000348990 TRIM74Q86UV6 250 aa18.41■□□□□ 0.54
APP-202ENST00000348990 TRIM73Q86UV7 250 aa18.41■□□□□ 0.54
APP-202ENST00000348990 CCDC28BQ9BUN5 200 aa18.41■□□□□ 0.54
APP-202ENST00000348990 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
APP-202ENST00000348990 ACSS2Q9NR19 701 aa18.41■□□□□ 0.54
APP-202ENST00000348990 ASS1P00966 412 aaKnown RBP18.41■□□□□ 0.54
APP-202ENST00000348990 TSHRP16473 764 aa18.41■□□□□ 0.54
APP-202ENST00000348990 ITGA9Q13797 1035 aa18.41■□□□□ 0.54
APP-202ENST00000348990 KCNJ11Q14654 390 aa18.41■□□□□ 0.54
APP-202ENST00000348990 PHTF2Q8N3S3 785 aa18.41■□□□□ 0.54
APP-202ENST00000348990 FRMD8P1Q9BZ68 369 aaPredicted RBP18.41■□□□□ 0.54
APP-202ENST00000348990 STK32BQ9NY57 414 aa18.41■□□□□ 0.54
APP-202ENST00000348990 HMGCRP04035 888 aa18.41■□□□□ 0.54
APP-202ENST00000348990 ASLP04424 464 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms