RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CTNNB1P35222 781 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 SKOR1P84550 965 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 MTMR3Q13615 1198 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 CDO1Q16878 200 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 MGAT5BQ3V5L5 792 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 LRRC38Q5VT99 294 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 EMBQ6PCB8 327 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 RHOT1Q8IXI2 618 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 UBL4BQ8N7F7 174 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 IRGQQ8WZA9 623 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 NPY6RQ99463 290 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 SEPT5Q99719 369 aaPredicted RBP15.33■□□□□ 0.05
CXCL12-201ENST00000343575 SH3GL2Q99962 352 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 POPDC2Q9HBU9 364 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 OSER1Q9NX31 292 aa15.33■□□□□ 0.05
CXCL12-201ENST00000343575 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.33■□□□□ 0.05
CXCL12-201ENST00000343575 YBX2Q9Y2T7 364 aaKnown RBP15.33■□□□□ 0.05
CXCL12-201ENST00000343575 ZNF638Q14966 1978 aaKnown RBP15.33■□□□□ 0.05
CXCL12-201ENST00000343575 CDH23Q9H251 3354 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 EIF3HO15372 352 aaKnown RBP eCLIP15.33■□□□□ 0.04
CXCL12-201ENST00000343575 CEP104O60308 925 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 LTFP02788 710 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 CA3P07451 260 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 SDC4P31431 198 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 PCK1P35558 622 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 RWDD2BP57060 319 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 DCAF6Q58WW2 860 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 TPGS2Q68CL5 300 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 ZDHHC14Q8IZN3 488 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 TNS4Q8IZW8 715 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 NUP93Q8N1F7 819 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 MICALL1Q8N3F8 863 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 ACTRT1Q8TDG2 376 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 FAM172AQ8WUF8 416 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 ACSF2Q96CM8 615 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-201ENST00000343575 SPATA17Q96L03 361 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 TBCBQ99426 244 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 HERPUD2Q9BSE4 406 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 PLVAPQ9BX97 442 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 NMUR1Q9HB89 426 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 TTC7AQ9ULT0 858 aaPredicted RBP15.33■□□□□ 0.04
CXCL12-201ENST00000343575 NR2E1Q9Y466 385 aa15.33■□□□□ 0.04
CXCL12-201ENST00000343575 TRUB2O95900 331 aaKnown RBP15.32■□□□□ 0.04
CXCL12-201ENST00000343575 NOS2P35228 1153 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 PBX2P40425 430 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 IFRD2Q12894 506 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-201ENST00000343575 BSPRYQ5W0U4 402 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 KATNAL2Q8IYT4 538 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 KLHL11Q9NVR0 708 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 PCSK1NQ9UHG2 260 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 MTUS1Q9ULD2 1270 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 USP18Q9UMW8 372 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 LZTS1Q9Y250 596 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 IRAK3Q9Y616 596 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 FAM169AQ9Y6X4 670 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 PLXNA3P51805 1871 aa15.32■□□□□ 0.04
CXCL12-201ENST00000343575 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-201ENST00000343575 SRRM3A6NNA2 597 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-201ENST00000343575 AGPSO00116 658 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 SART1O43290 800 aaKnown RBP15.31■□□□□ 0.04
CXCL12-201ENST00000343575 ENDOD1O94919 500 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 GJC1P36383 396 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 SSR1P43307 286 aaKnown RBP15.31■□□□□ 0.04
CXCL12-201ENST00000343575 SLC25A52Q3SY17 297 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 GLE1Q53GS7 698 aaKnown RBP15.31■□□□□ 0.04
CXCL12-201ENST00000343575 KCNT1Q5JUK3 1230 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 DENND5BQ6ZUT9 1274 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 POLNQ7Z5Q5 900 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 POF1BQ8WVV4 589 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 RAPGEF5Q92565 580 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 EDEM1Q92611 657 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 NGRNQ9NPE2 291 aaKnown RBP15.31■□□□□ 0.04
CXCL12-201ENST00000343575 HSFX1Q9UBD0 423 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 SCML2Q9UQR0 700 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 TCRBV7S2A1N4TA0A589 114 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 HIDE1A8MVS5 230 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 GRM6O15303 877 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 RNF8O76064 485 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 CXCL14O95715 111 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 RARAP10276 462 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 LLGL1Q15334 1064 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 SMTNL2Q2TAL5 461 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 LILRA6Q6PI73 481 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 GIPC2Q8TF65 315 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 CAVIN3Q969G5 261 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 RUFY1Q96T51 708 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 MAGEB5Q9BZ81 275 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 ZWILCHQ9H900 591 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.31■□□□□ 0.04
CXCL12-201ENST00000343575 RNF14Q9UBS8 474 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 MYO16Q9Y6X6 1858 aa15.31■□□□□ 0.04
CXCL12-201ENST00000343575 H0YGN5 161 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 FGGP02679 453 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 NCAM1P13591 858 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 RPL10AP62906 217 aaKnown RBP15.3■□□□□ 0.04
CXCL12-201ENST00000343575 EIF4EBP2Q13542 120 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-201ENST00000343575 BEND5Q7L4P6 421 aa15.3■□□□□ 0.04
CXCL12-201ENST00000343575 STRADAQ7RTN6 431 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms