RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TNIP2Q8NFZ5 429 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 OTUB1Q96FW1 271 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 WDR18Q9BV38 432 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 LRRC19Q9H756 370 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 STRNO43815 780 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 GRIN3BO60391 1043 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 FSBPO95073 299 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 ST8SIA6P61647 398 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 CERS5Q8N5B7 392 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 CCDC33Q8N5R6 958 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 COLEC11Q9BWP8 271 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 F8VP50 259 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 VPS26AO75436 327 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 SPATA31C1P0DKV0 1188 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 ZNF177Q13360 481 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 CYLC2Q14093 348 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 NUDT18Q6ZVK8 323 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 SRPK1Q96SB4 655 aaKnown RBP17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 IL1RL2Q9HB29 575 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 THAP1Q9NVV9 213 aa17.6■□□□□ 0.41
TRAPPC11-201ENST00000334690 ADGRA2Q96PE1 1338 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 KANSL1LA0AUZ9 987 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 TRDMT1O14717 391 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 MICAL2O94851 1124 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 SERPINB5P36952 375 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 THPOP40225 353 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 ALDH1A3P47895 512 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 GLRBP48167 497 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 CDH8P55286 799 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 CDH17Q12864 832 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 MIB1Q86YT6 1006 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 CCDC60Q8IWA6 550 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 SYTL2Q9HCH5 934 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 TEKT2Q9UIF3 430 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 NUDT17P0C025 328 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 RFWD2Q8NHY2 731 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 FCHO1O14526 889 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 MYBL2P10244 700 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 PSMA4P25789 261 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 MAP3K7CLP57077 242 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 SYT15Q9BQS2 421 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 SIKE1Q9BRV8 207 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 VTA1Q9NP79 307 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 CRLS1Q9UJA2 301 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 TRHDEQ9UKU6 1024 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 SUFUQ9UMX1 484 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 USP20Q9Y2K6 914 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 SH3BP1Q9Y3L3 701 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 ATP5BP06576 529 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 DNAJB2P25686 324 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 ILF2Q12905 390 aaKnown RBP17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 ITGB3BPQ13352 177 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 RNF180Q86T96 592 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 ZNF75CPQ92670 426 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 ECSITQ9BQ95 431 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 SAR1AQ9NR31 198 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 SNTG2Q9NY99 539 aa17.59■□□□□ 0.41
TRAPPC11-201ENST00000334690 HACD1B0YJ81 288 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 F5H5T6 163 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 ADRB2P07550 413 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 YY1P25490 414 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 SLC6A3Q01959 620 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 CNTN2Q02246 1040 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 GTF2H3Q13889 308 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 CCDC153Q494R4 210 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 DUPD1Q68J44 220 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 FBXO32Q969P5 355 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 ZNF333Q96JL9 665 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 PRDM16Q9HAZ2 1276 aa17.58■□□□□ 0.41
TRAPPC11-201ENST00000334690 ZMYM2Q9UBW7 1377 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 LOC102724159A0A0B4J2E5 919 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 SIGLEC16A6NMB1 481 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 TGFB1I1O43294 461 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 FKBP9O95302 570 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 APOA1P02647 267 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 ALADP13716 330 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 PRKAA2P54646 552 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 CDK16Q00536 496 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 PRKAA1Q13131 559 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 PWP2Q15269 919 aaKnown RBP17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 GRIK4Q16099 956 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 FKBP9P1Q75LS8 142 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 ZNF410Q86VK4 478 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 L3MBTL3Q96JM7 780 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 SLIT3O75094 1523 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 HEATR9A2RTY3 570 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 MAN1A2O60476 641 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 TRIM13O60858 407 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 DEAF1O75398 565 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 ALBP02768 609 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 MPOP05164 745 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 KDELR1P24390 212 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 SERPINB3P29508 390 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 MAMLD1Q13495 774 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 N4BP2L1Q5TBK1 243 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 CKAP2Q8WWK9 683 aa17.58■□□□□ 0.4
TRAPPC11-201ENST00000334690 LACTBL1A8MY62 500 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms