RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 RALGPS2Q86X27 583 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-201ENST00000322535 CATSPER3Q86XQ3 398 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 SYCE1Q8N0S2 351 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 GALNT6Q8NCL4 622 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 GSTCDQ8NEC7 633 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 ETNPPLQ8TBG4 499 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 SYTL5Q8TDW5 730 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-201ENST00000322535 CRYGNQ8WXF5 182 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 HERVK_113Q902F9 699 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 DPF3Q92784 378 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 EME1Q96AY2 570 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 HES6Q96HZ4 224 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 UROC1Q96N76 676 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 SPOCK3Q9BQ16 436 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 MARCH7Q9H992 704 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 SAR1AQ9NR31 198 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 PARP2Q9UGN5 583 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 ZNF214Q9UL59 606 aaPredicted RBP10.67□□□□□ -0.7
SF3B2-201ENST00000322535 RIMKLBQ9ULI2 386 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 ERVK-11Q9UQG0 969 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 NEU2Q9Y3R4 380 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 CAPN8A6NHC0 703 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 GMNNO75496 209 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 FGFR1P11362 822 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 CTRB1P17538 263 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 KRT4P19013 534 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 CIITAP33076 1130 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 GJA5P36382 358 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 IREB2P48200 963 aaKnown RBP10.67□□□□□ -0.7
SF3B2-201ENST00000322535 PTPN5P54829 565 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 BASP1P80723 227 aaKnown RBP10.67□□□□□ -0.7
SF3B2-201ENST00000322535 SLC1A5Q15758 541 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 BTBD8Q5XKL5 378 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 CTRB2Q6GPI1 263 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 NEK5Q6P3R8 708 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 UTS2BQ765I0 119 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 PRELID2Q8N945 189 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 SLC35G2Q8TBE7 412 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 PTCD3Q96EY7 689 aaKnown RBP10.67□□□□□ -0.7
SF3B2-201ENST00000322535 GIMAP5Q96F15 307 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 FGFBP2Q9BYJ0 223 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 MUC3BQ9H195 1237 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 ANLNQ9NQW6 1124 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 UCKL1Q9NWZ5 548 aa10.67□□□□□ -0.7
SF3B2-201ENST00000322535 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.67□□□□□ -0.7
SF3B2-201ENST00000322535 IGLV3-22A0A075B6J6 115 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 XPO1O14980 1071 aaKnown RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 PIAS1O75925 651 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 PGK2P07205 417 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 SLC9A1P19634 815 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 PTGIRP43119 386 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 CLK1P49759 484 aaKnown RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 EPHB1P54762 984 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 GALCP54803 685 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 MRPS9P82933 396 aaKnown RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 PPP2R2BQ00005 443 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 AP3B2Q13367 1082 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 GNA13Q14344 377 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 CYP2A13Q16696 494 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 EDRF1Q3B7T1 1238 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 TMEM63BQ5T3F8 832 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 CATSPERGQ6ZRH7 1159 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 DGLUCYQ7Z3D6 616 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 ZNF598Q86UK7 904 aaKnown RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 NLRX1Q86UT6 975 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 MMAAQ8IVH4 418 aaKnown RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 ZNF577Q9BSK1 485 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 TXNRD2Q9NNW7 524 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 DMTF1Q9Y222 760 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 COMMD10Q9Y6G5 202 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 ARPC4-TTLL3A0A0A6YYG9 625 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 MEI4A8MW99 385 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 A8MXQ7 604 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 LAD1O00515 517 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 CHRNB2P17787 502 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 CCNCP24863 283 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 DSG3P32926 999 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 PHKA2P46019 1235 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 MCCD1P59942 119 aaPredicted RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 EFTUD2Q15029 972 aaKnown RBP eCLIP10.66□□□□□ -0.78e-7■■■■■ 30.3
SF3B2-201ENST00000322535 Q3C1V9 767 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 ARHGEF16Q5VV41 709 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 CENPPQ6IPU0 288 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 USP50Q70EL3 339 aaPredicted RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 TRMT10CQ7L0Y3 403 aaKnown RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 ICA1LQ8NDH6 482 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 LARP4BQ92615 738 aaKnown RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 EFHD2Q96C19 240 aaPredicted RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 RBM15Q96T37 977 aaKnown RBP eCLIP10.66□□□□□ -0.72e-8■■■■□ 24.1
SF3B2-201ENST00000322535 COQ7Q99807 217 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 IKZF4Q9H2S9 585 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 TBC1D14Q9P2M4 693 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 WRAP73Q9P2S5 460 aaPredicted RBP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 STXBP5LQ9Y2K9 1186 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
SF3B2-201ENST00000322535 SPEF1Q9Y4P9 236 aa10.66□□□□□ -0.7
SF3B2-201ENST00000322535 SOBPA7XYQ1 873 aa10.65□□□□□ -0.7
SF3B2-201ENST00000322535 H7C0C1 242 aa10.65□□□□□ -0.7
SF3B2-201ENST00000322535 GOLGA8RI6L899 631 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms