RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 TRIM15Q9C019 465 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 CDYLQ9Y232 598 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 MRPL42Q9Y6G3 142 aaKnown RBP16.93■□□□□ 0.3
SFXN1-201ENST00000321442 USP1O94782 785 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 MIPP30301 263 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 CRADDP78560 199 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 MXD4Q14582 209 aaPredicted RBP16.93■□□□□ 0.3
SFXN1-201ENST00000321442 FAM182AQ5T1J6 154 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 MFSD14CQ5VZR4 134 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 FOXR2Q6PJQ5 311 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 ARHGAP22Q7Z5H3 698 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 ZNF212Q9UDV6 495 aa16.93■□□□□ 0.3
SFXN1-201ENST00000321442 MYH14Q7Z406 1995 aaKnown RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 KLRG2A4D1S0 409 aaPredicted RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 C3orf70A6NLC5 250 aaPredicted RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 ANGPT2O15123 496 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 AVILO75366 819 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 NPTXRO95502 500 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 BMT2Q1RMZ1 405 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 EML3Q32P44 896 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 ITPRIPL1Q6GPH6 555 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 NPNTQ6UXI9 565 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 CLPTM1LQ96KA5 538 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 CGRRF1Q99675 332 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 CYP4F12Q9HCS2 524 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 POLIQ9UNA4 740 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 NID2Q14112 1375 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 HBP1O60381 514 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 PAEPP09466 180 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 PTGIRP43119 386 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 DPYSL3Q14195 570 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 RIPOR1Q6ZS17 1223 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 PLEKHH3Q7Z736 793 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 APLFQ8IW19 511 aaPredicted RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 DIS3LQ8TF46 1054 aaKnown RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 ZDHHC18Q9NUE0 388 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 UBP1Q9NZI7 540 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 SNX5Q9Y5X3 404 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 C5orf60A6NFR6 353 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 SDR42E2A6NKP2 422 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 C2CD2LO14523 706 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 GFAPP14136 432 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 RBL1P28749 1068 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 PKNOX1P55347 436 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 NME5P56597 212 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 HSDL1Q3SXM5 330 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 KHDC1Q4VXA5 237 aaKnown RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 MAGEC3Q8TD91 643 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 HASPINQ8TF76 798 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 PDCD6IPQ8WUM4 868 aaKnown RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 ZNF317Q96PQ6 595 aaPredicted RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 SLITRK1Q96PX8 696 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 CNPY3Q9BT09 278 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 FRMD8Q9BZ67 464 aaPredicted RBP16.92■□□□□ 0.3
SFXN1-201ENST00000321442 PORCNQ9H237 461 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 ZFYVE28Q9HCC9 887 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 GON4LQ3T8J9 2241 aa16.92■□□□□ 0.3
SFXN1-201ENST00000321442 MGEA5O60502 916 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 CXCL8P10145 99 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 THRAP10827 490 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 PSMC3P17980 439 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 FOXN2P32314 431 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 SLC1A6P48664 564 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 TBCCQ15814 346 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 PCSK7Q16549 785 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 BNC2Q6ZN30 1099 aaPredicted RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 MFN1Q8IWA4 741 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 IPMKQ8NFU5 416 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 CNDP1Q96KN2 507 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 NMUR2Q9GZQ4 415 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 USP2O75604 605 aaPredicted RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 ATN1P54259 1190 aaPredicted RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 ROR2Q01974 943 aaKnown RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 PDAP1Q13442 181 aaKnown RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 DCAF12L1Q5VU92 463 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 C6orf89Q6UWU4 347 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 MAP4K3Q8IVH8 894 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 ELMO2Q96JJ3 720 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 SIX2Q9NPC8 291 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 CPSF3Q9UKF6 684 aaKnown RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 HES2Q9Y543 173 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 STRCP1A6NGW2 1772 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 PFDN6O15212 129 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 JAM2P57087 298 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 MRPS22P82650 360 aaKnown RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 PTPN11Q06124 597 aaPredicted RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 DGKDQ16760 1214 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 TTC33Q6PID6 262 aaPredicted RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 METTL7BQ6UX53 244 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 TFB1MQ8WVM0 346 aaKnown RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 VCPIP1Q96JH7 1222 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 DCUN1D5Q9BTE7 237 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 LRMDAQ9H2I8 198 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 THAP1Q9NVV9 213 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 PAIP2BQ9ULR5 123 aaKnown RBP16.91■□□□□ 0.3
SFXN1-201ENST00000321442 CHKBQ9Y259 395 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 GOLGA8TH3BQL2 631 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 USP12O75317 370 aa16.91■□□□□ 0.3
SFXN1-201ENST00000321442 SMNDC1O75940 238 aaKnown RBP eCLIP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms