RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 NCAM1P13591 858 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 IL4RP24394 825 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 CYP2F1P24903 491 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 ATP5OP48047 213 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 NDUFV1P49821 464 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 CDR1P51861 262 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 SMARCB1Q12824 385 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 MMRN1Q13201 1228 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 SLC29A2Q14542 456 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 EFHC2Q5JST6 749 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 NTAN1Q96AB6 310 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 TTC25Q96NG3 672 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 CCDC77Q9BR77 488 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 TMEM175Q9BSA9 504 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 SEMA4AQ9H3S1 761 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 NRDE2Q9H7Z3 1164 aa19.71■□□□□ 0.75
VBP1-201ENST00000286428 BCLAF3A2AJT9 711 aaKnown RBP19.7■□□□□ 0.74
VBP1-201ENST00000286428 H3BRJ5 948 aa19.7■□□□□ 0.74
VBP1-201ENST00000286428 PQBP1O60828 265 aaKnown RBP19.7■□□□□ 0.74
VBP1-201ENST00000286428 HTRA3P83110 453 aa19.7■□□□□ 0.74
VBP1-201ENST00000286428 KRT71Q3SY84 523 aa19.7■□□□□ 0.74
VBP1-201ENST00000286428 C1orf53Q5VUE5 145 aa19.7■□□□□ 0.74
VBP1-201ENST00000286428 VSTM1Q6UX27 236 aa19.7■□□□□ 0.74
VBP1-201ENST00000286428 PDZD4Q76G19 769 aaPredicted RBP19.7■□□□□ 0.74
VBP1-201ENST00000286428 CDKL3Q8IVW4 592 aaPredicted RBP19.7■□□□□ 0.74
VBP1-201ENST00000286428 PPIL6Q8IXY8 311 aa19.7■□□□□ 0.74
VBP1-201ENST00000286428 HIPK3Q9H422 1215 aa19.7■□□□□ 0.74
VBP1-201ENST00000286428 SAE1Q9UBE0 346 aaPredicted RBP19.7■□□□□ 0.74
VBP1-201ENST00000286428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.69■□□□□ 0.74
VBP1-201ENST00000286428 OR6C75A6NL08 312 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 TP73O15350 636 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 TTC4O95801 387 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 USP17L7P0C7H9 530 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 GRIK1P39086 918 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 SLC39A5Q6ZMH5 540 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 PPP1R21Q6ZMI0 780 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 CENPUQ71F23 418 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 OR10T2Q8NGX3 314 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 PCDH19Q8TAB3 1148 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 SLC7A14Q8TBB6 771 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 ARL8AQ96BM9 186 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 ZCWPW1Q9H0M4 648 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 CDC42EP4Q9H3Q1 356 aaKnown RBP19.69■□□□□ 0.74
VBP1-201ENST00000286428 PAK5Q9P286 719 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 ADAM28Q9UKQ2 775 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 USP3Q9Y6I4 520 aa19.69■□□□□ 0.74
VBP1-201ENST00000286428 TDRD15B5MCY1 1934 aaKnown RBP19.69■□□□□ 0.74
VBP1-201ENST00000286428 YJEFN3A6XGL0 299 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 E7ENQ6 273 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 CXCL10P02778 98 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 ITGB1P05556 798 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 CCDC142Q17RM4 750 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 RAB6CQ53S08 254 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 TTMPQ5BVD1 217 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 EMC10Q5UCC4 262 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 C1orf228Q6PIY5 440 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 FAM131BQ86XD5 332 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 NPAS4Q8IUM7 802 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 PQLC3Q8N755 202 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 FRMD8Q9BZ67 464 aaPredicted RBP19.68■□□□□ 0.74
VBP1-201ENST00000286428 RAB6CQ9H0N0 254 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 CENPHQ9H3R5 247 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 GPATCH2LQ9NWQ4 482 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 FRMPD3Q5JV73 1810 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 HACD1B0YJ81 288 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 NRP1O14786 923 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 TRIM66O15016 1216 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 EIF3HO15372 352 aaKnown RBP eCLIP19.68■□□□□ 0.74
VBP1-201ENST00000286428 IVLP07476 585 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 PECAM1P16284 738 aaPredicted RBP19.68■□□□□ 0.74
VBP1-201ENST00000286428 TFE3P19532 575 aaPredicted RBP19.68■□□□□ 0.74
VBP1-201ENST00000286428 ATP5DP30049 168 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 SCAPQ12770 1279 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 NME3Q13232 169 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 MTFR1Q15390 333 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 CA9Q16790 459 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 RNASEH2BQ5TBB1 312 aaKnown RBP19.68■□□□□ 0.74
VBP1-201ENST00000286428 LRRTM3Q86VH5 581 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 CCDC185Q8N715 623 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 PGM2Q96G03 612 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 CASD1Q96PB1 797 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 CSPG4P5Q96PW8 444 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 RBM15Q96T37 977 aaKnown RBP eCLIP19.68■□□□□ 0.74
VBP1-201ENST00000286428 ADAM7Q9H2U9 754 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 ABCC13Q9NSE7 274 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 NAALADL1Q9UQQ1 740 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 PRG3Q9Y2Y8 225 aaPredicted RBP19.68■□□□□ 0.74
VBP1-201ENST00000286428 HEY1Q9Y5J3 304 aa19.68■□□□□ 0.74
VBP1-201ENST00000286428 SF3B1O75533 1304 aaKnown RBP eCLIP19.67■□□□□ 0.74
VBP1-201ENST00000286428 H7C4K7 107 aa19.67■□□□□ 0.74
VBP1-201ENST00000286428 ZSCAN5DPP0CG00 497 aa19.67■□□□□ 0.74
VBP1-201ENST00000286428 HCAR3P49019 387 aa19.67■□□□□ 0.74
VBP1-201ENST00000286428 CTCFP49711 727 aaPredicted RBP19.67■□□□□ 0.74
VBP1-201ENST00000286428 SYPL2Q5VXT5 272 aa19.67■□□□□ 0.74
VBP1-201ENST00000286428 ZNF280DQ6N043 979 aa19.67■□□□□ 0.74
VBP1-201ENST00000286428 ZC3H18Q86VM9 953 aaKnown RBP19.67■□□□□ 0.74
VBP1-201ENST00000286428 FAM71DQ8N9W8 422 aa19.67■□□□□ 0.74
VBP1-201ENST00000286428 OR2W6PQ8NHA6 318 aa19.67■□□□□ 0.74
VBP1-201ENST00000286428 NDRG1Q92597 394 aaKnown RBP19.67■□□□□ 0.74
VBP1-201ENST00000286428 ZBTB9Q96C00 473 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms