RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 DNAJC6O75061 913 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 CSDE1O75534 798 aaKnown RBP26.01■■□□□ 1.75
ROM1-201ENST00000278833 T-ENOLP0DO92 83 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 NR2C2P49116 596 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 CCNG1P51959 295 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 MARCH8Q5T0T0 291 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 FAM91A1Q658Y4 838 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 CFAP61Q8NHU2 1237 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 SLC7A6OSQ96CW6 309 aaPredicted RBP26.01■■□□□ 1.75
ROM1-201ENST00000278833 TSPAN18Q96SJ8 248 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 TUBB6Q9BUF5 446 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 HESX1Q9UBX0 185 aa26.01■■□□□ 1.75
ROM1-201ENST00000278833 GCATO75600 419 aa26■■□□□ 1.75
ROM1-201ENST00000278833 HDAC4P56524 1084 aa26■■□□□ 1.75
ROM1-201ENST00000278833 YWHAGP61981 247 aaKnown RBP eCLIP26■■□□□ 1.75
ROM1-201ENST00000278833 FAAP100Q0VG06 881 aa26■■□□□ 1.75
ROM1-201ENST00000278833 GRIK4Q16099 956 aa26■■□□□ 1.75
ROM1-201ENST00000278833 C1orf228Q6PIY5 440 aa26■■□□□ 1.75
ROM1-201ENST00000278833 SERAC1Q96JX3 654 aa26■■□□□ 1.75
ROM1-201ENST00000278833 ANKRD27Q96NW4 1050 aa26■■□□□ 1.75
ROM1-201ENST00000278833 MRPL45Q9BRJ2 306 aaKnown RBP26■■□□□ 1.75
ROM1-201ENST00000278833 NRDE2Q9H7Z3 1164 aa26■■□□□ 1.75
ROM1-201ENST00000278833 SAGE1Q9NXZ1 904 aa26■■□□□ 1.75
ROM1-201ENST00000278833 TRIM33Q9UPN9 1127 aa26■■□□□ 1.75
ROM1-201ENST00000278833 TRIP11Q15643 1979 aa26■■□□□ 1.75
ROM1-201ENST00000278833 H3BRB1 525 aa26■■□□□ 1.75
ROM1-201ENST00000278833 RBL1P28749 1068 aa26■■□□□ 1.75
ROM1-201ENST00000278833 PRKD1Q15139 912 aaPredicted RBP26■■□□□ 1.75
ROM1-201ENST00000278833 CYS1Q717R9 158 aa26■■□□□ 1.75
ROM1-201ENST00000278833 CAND1Q86VP6 1230 aaKnown RBP26■■□□□ 1.75
ROM1-201ENST00000278833 MTBPQ96DY7 904 aa26■■□□□ 1.75
ROM1-201ENST00000278833 TRIM55Q9BYV6 548 aa26■■□□□ 1.75
ROM1-201ENST00000278833 TUT1Q9H6E5 874 aaKnown RBP26■■□□□ 1.75
ROM1-201ENST00000278833 NGRNQ9NPE2 291 aaKnown RBP26■■□□□ 1.75
ROM1-201ENST00000278833 KANSL3Q9P2N6 904 aa26■■□□□ 1.75
ROM1-201ENST00000278833 ZNF236Q9UL36 1845 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 NRLP54845 237 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 E2F5Q15329 346 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 CDO1Q16878 200 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 CTC1Q2NKJ3 1217 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 LGSNQ5TDP6 509 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 C12orf29Q8N999 325 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 GPRC5AQ8NFJ5 357 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 BEST2Q8NFU1 509 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 QKIQ96PU8 341 aaKnown RBP eCLIP25.99■■□□□ 1.75
ROM1-201ENST00000278833 PARK7Q99497 189 aaKnown RBP25.99■■□□□ 1.75
ROM1-201ENST00000278833 TSSK1BQ9BXA7 367 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 ZFYVE28Q9HCC9 887 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 ZFP69BQ9UJL9 534 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 C15orf41Q9Y2V0 281 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 NME7Q9Y5B8 376 aa25.99■■□□□ 1.75
ROM1-201ENST00000278833 GABBR2O75899 941 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 KRT37O76014 449 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 ZNF286BP0CG31 522 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 RGS7P49802 495 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 CDK18Q07002 472 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 GJC2Q5T442 439 aaPredicted RBP25.98■■□□□ 1.75
ROM1-201ENST00000278833 SLC27A1Q6PCB7 646 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 LRRC6Q86X45 466 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 TRIM42Q8IWZ5 723 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 CFHR5Q9BXR6 569 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 ADAMTS10Q9H324 1103 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 PLAC1Q9HBJ0 212 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.98■■□□□ 1.75
ROM1-201ENST00000278833 SNRPAP09012 282 aaKnown RBP25.98■■□□□ 1.75
ROM1-201ENST00000278833 HSPA1AP0DMV8 641 aaKnown RBP25.98■■□□□ 1.75
ROM1-201ENST00000278833 HSPA1BP0DMV9 641 aaKnown RBP25.98■■□□□ 1.75
ROM1-201ENST00000278833 CA9Q16790 459 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 CLNKQ7Z7G1 428 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 NPHS2Q9NP85 383 aa25.98■■□□□ 1.75
ROM1-201ENST00000278833 RCOR3Q9P2K3 495 aaPredicted RBP25.98■■□□□ 1.75
ROM1-201ENST00000278833 MTO1Q9Y2Z2 717 aaKnown RBP25.98■■□□□ 1.75
ROM1-201ENST00000278833 RRN3P2A6NIE6 340 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 STRNO43815 780 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 APOEP02649 317 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 CYP2F1P24903 491 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 TARSP26639 723 aaKnown RBP25.97■■□□□ 1.75
ROM1-201ENST00000278833 ADORA2AP29274 412 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 L1CAMP32004 1257 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 BCAT1P54687 386 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 BST2Q10589 180 aaKnown RBP25.97■■□□□ 1.75
ROM1-201ENST00000278833 DBN1Q16643 649 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 PLEKHG4Q58EX7 1191 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 ALKAL1Q6UXT8 129 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 DPH6Q7L8W6 267 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 ACOT1Q86TX2 421 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 CRYBG2Q8N1P7 616 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 TAB3Q8N5C8 712 aaPredicted RBP25.97■■□□□ 1.75
ROM1-201ENST00000278833 RAB3IL1Q8TBN0 382 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 PTPRN2Q92932 1015 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 STAMBPL1Q96FJ0 436 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 MYCBPQ99417 103 aaPredicted RBP25.97■■□□□ 1.75
ROM1-201ENST00000278833 XAB2Q9HCS7 855 aaKnown RBP25.97■■□□□ 1.75
ROM1-201ENST00000278833 GPATCH2LQ9NWQ4 482 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 ZC3H7BQ9UGR2 993 aaKnown RBP25.97■■□□□ 1.75
ROM1-201ENST00000278833 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.97■■□□□ 1.75
ROM1-201ENST00000278833 SNX9Q9Y5X1 595 aa25.97■■□□□ 1.75
ROM1-201ENST00000278833 GRAP2O75791 330 aa25.96■■□□□ 1.75
ROM1-201ENST00000278833 PTPN4P29074 926 aa25.96■■□□□ 1.75
ROM1-201ENST00000278833 HOXA11P31270 313 aaPredicted RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms