RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 B4GALNT2Q8NHY0 566 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 PIWIL2Q8TC59 973 aaKnown RBP17.12■□□□□ 0.33
SCAP-201ENST00000265565 HELQQ8TDG4 1101 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 ARHGEF37A1IGU5 675 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 E5RJQ4 531 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 LGR5O75473 907 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 PGK2P07205 417 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 HOXA10P31260 410 aaPredicted RBP17.12■□□□□ 0.33
SCAP-201ENST00000265565 FOXN2P32314 431 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 BACE1P56817 501 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 SPOUT1Q5T280 376 aaKnown RBP17.12■□□□□ 0.33
SCAP-201ENST00000265565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCAP-201ENST00000265565 ABI1Q8IZP0 508 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 DIS3LQ8TF46 1054 aaKnown RBP17.12■□□□□ 0.33
SCAP-201ENST00000265565 ZNF317Q96PQ6 595 aaPredicted RBP17.12■□□□□ 0.33
SCAP-201ENST00000265565 NMUR2Q9GZQ4 415 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 ELP3Q9H9T3 547 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 ERAP1Q9NZ08 941 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 CLIC5Q9NZA1 410 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 TCRBV9S1A1TA0A576 114 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 HADHAP40939 763 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 SERPINB8P50452 374 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 CCNHP51946 323 aaPredicted RBP17.12■□□□□ 0.33
SCAP-201ENST00000265565 MRPS22P82650 360 aaKnown RBP17.12■□□□□ 0.33
SCAP-201ENST00000265565 NAPEPLDQ6IQ20 393 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 NIPA1Q7RTP0 329 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 SNX32Q86XE0 403 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 RMDN1Q96DB5 314 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 PRPF18Q99633 342 aaKnown RBP17.12■□□□□ 0.33
SCAP-201ENST00000265565 IL1RAPL1Q9NZN1 696 aa17.12■□□□□ 0.33
SCAP-201ENST00000265565 GSC2O15499 205 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 MICAL2O94851 1124 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 VTNP04004 478 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 ETS2P15036 469 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 ACADSBP45954 432 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 UBAP2LQ14157 1087 aaKnown RBP17.11■□□□□ 0.33
SCAP-201ENST00000265565 RNF220Q5VTB9 566 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 ANGPTL8Q6UXH0 198 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 CCNJLQ8IV13 435 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCAP-201ENST00000265565 ULK4Q96C45 1275 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 MAP3K20Q9NYL2 800 aaKnown RBP17.11■□□□□ 0.33
SCAP-201ENST00000265565 PCDHA2Q9Y5H9 948 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 ADGRA3Q8IWK6 1321 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 ZMYM2Q9UBW7 1377 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 A0A087WZ62 844 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 MAGEB2O15479 319 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 TM4SF1P30408 202 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 PLIN5Q00G26 463 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 ZBTB17Q13105 803 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 APOBEC3FQ8IUX4 373 aaKnown RBP17.11■□□□□ 0.33
SCAP-201ENST00000265565 ASAP3Q8TDY4 903 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 FDXACB1Q9BRP7 624 aaPredicted RBP17.11■□□□□ 0.33
SCAP-201ENST00000265565 TBC1D23Q9NUY8 699 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 CHKBQ9Y259 395 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 ATP8B3O60423 1300 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 ASTN2O75129 1339 aaPredicted RBP17.11■□□□□ 0.33
SCAP-201ENST00000265565 CNTN2Q02246 1040 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
SCAP-201ENST00000265565 VSTM1Q6UX27 236 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 MAN1C1Q9NR34 630 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 HACD3Q9P035 362 aa17.11■□□□□ 0.33
SCAP-201ENST00000265565 A0A096LPK6 155 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 E5RI56 91 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 H0YGN5 161 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 ITGAVP06756 1048 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 C6orf222P0C671 652 aaPredicted RBP17.1■□□□□ 0.33
SCAP-201ENST00000265565 CHRNB2P17787 502 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 ACO1P21399 889 aaKnown RBP17.1■□□□□ 0.33
SCAP-201ENST00000265565 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 BBS12Q6ZW61 710 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 ZSCAN18Q8TBC5 510 aaPredicted RBP17.1■□□□□ 0.33
SCAP-201ENST00000265565 ZNF398Q8TD17 642 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 OPTNQ96CV9 577 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 CLPTM1LQ96KA5 538 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 RNF19AQ9NV58 838 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 NFS1Q9Y697 457 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 TIMM44O43615 452 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 TRIM13O60858 407 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 USP1O94782 785 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 CNTFP26441 200 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 GP5P40197 560 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 TNFSF9P41273 254 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 FAM83EQ2M2I3 478 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 AGKQ53H12 422 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 C6orf89Q6UWU4 347 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 PHF13Q86YI8 300 aaPredicted RBP17.1■□□□□ 0.33
SCAP-201ENST00000265565 NRDE2Q9H7Z3 1164 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 COPS7BQ9H9Q2 264 aaPredicted RBP17.1■□□□□ 0.33
SCAP-201ENST00000265565 SIGLEC16A6NMB1 481 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 PEX1O43933 1283 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 ANPEPP15144 967 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 DSG3P32926 999 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 DGKDQ16760 1214 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 IMPG1Q17R60 797 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 KHDC1Q4VXA5 237 aaKnown RBP17.1■□□□□ 0.33
SCAP-201ENST00000265565 ZBTB49Q6ZSB9 765 aa17.1■□□□□ 0.33
SCAP-201ENST00000265565 EGFL8Q99944 293 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms