RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SORBS1Q9BX66 1292 aaKnown RBP5.16□□□□□ -1.58
CCDC54-201ENST00000261058 KCNK9Q9NPC2 374 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 LUZP4Q9P127 313 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 PCDHGB3Q9Y5G1 929 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 HS3ST3A1Q9Y663 406 aa5.16□□□□□ -1.58
CCDC54-201ENST00000261058 PNMA6EA0A0J9YXQ4 647 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 CTIFO43310 598 aaKnown RBP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 DNPH1O43598 174 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 TMPRSS11DO60235 418 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 FAM155BO75949 473 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 USP1O94782 785 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 FGAP02671 866 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 MYCLP12524 364 aaPredicted RBP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 WT1P19544 449 aaPredicted RBP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 ADRA1DP25100 572 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 KLRK1P26718 216 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 CYP2C18P33260 490 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 DGKQP52824 942 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 PSG6Q00889 435 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 COL10A1Q03692 680 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 DEUP1Q05D60 604 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 DNASE1L3Q13609 305 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 TMEM196Q5HYL7 178 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 SLC44A2Q8IWA5 706 aaPredicted RBP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 SFTPA1Q8IWL2 248 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 GALNT15Q8N3T1 639 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 SIRT6Q8N6T7 355 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 LINC01465Q8N7H1 131 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 PNPLA1Q8N8W4 532 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 MYRIPQ8NFW9 859 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 TBC1D5Q92609 795 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 LTV1Q96GA3 475 aaPredicted RBP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 TIMP4Q99727 224 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 RTKNQ9BST9 563 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 DPCDQ9BVM2 203 aaPredicted RBP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 EPS8L2Q9H6S3 715 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 GAR1Q9NY12 217 aaKnown RBP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 BCCIPQ9P287 314 aaKnown RBP eCLIP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 SRP68Q9UHB9 627 aaKnown RBP5.15□□□□□ -1.58
CCDC54-201ENST00000261058 AMFRQ9UKV5 643 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 ADAMTS5Q9UNA0 930 aa5.15□□□□□ -1.58
CCDC54-201ENST00000261058 A0A087X1B8 175 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 AP4M1O00189 453 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 FCHO1O14526 889 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 CREB3O43889 395 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 ACTL6BO94805 426 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 RHOBTB3O94955 611 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 DHRS4L1P0CG22 281 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 CREB1P16220 341 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 CST5P28325 142 aaPredicted RBP5.14□□□□□ -1.59
CCDC54-201ENST00000261058 DIO1P49895 249 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 CCT8P50990 548 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 PDE1AP54750 535 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 EEFSECP57772 596 aaKnown RBP5.14□□□□□ -1.59
CCDC54-201ENST00000261058 DPTQ07507 201 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 RAPGEF1Q13905 1077 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 CSHL1Q14406 222 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 POSTNQ15063 836 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 TBC1D25Q3MII6 688 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 RNASE12Q5GAN4 147 aaKnown RBP5.14□□□□□ -1.59
CCDC54-201ENST00000261058 SULT6B1Q6IMI4 303 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 MRGPRGQ86SM5 289 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 ABHD11Q8NFV4 315 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 TBC1D20Q96BZ9 403 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 KAZALD1Q96I82 304 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 TTPALQ9BTX7 342 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 PCED1AQ9H1Q7 454 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 MLXIPQ9HAP2 919 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 ASAP1Q9ULH1 1129 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 DGKBQ9Y6T7 804 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 KAT6AQ92794 2004 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 FNDC1Q4ZHG4 1894 aaPredicted RBP5.14□□□□□ -1.59
CCDC54-201ENST00000261058 LOC105369274A0A096LPK9 316 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 LOC102723532A0A0G2JNH3 316 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 CYR61O00622 381 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 ORC4O43929 436 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 MBPP02686 304 aaPredicted RBP5.14□□□□□ -1.59
CCDC54-201ENST00000261058 NPSP0C0P6 89 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 EBLN1P0CF75 366 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 NDUFB7P17568 137 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 ENGP17813 658 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 CACNA2D1P54289 1103 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 SOX10P56693 466 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 AP2B1P63010 937 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 LMAN2Q12907 356 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 KLF10Q13118 480 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 PRKG1Q13976 671 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 TTC22Q5TAA0 569 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 GRASPQ7Z6J2 395 aaPredicted RBP5.14□□□□□ -1.59
CCDC54-201ENST00000261058 TRABD2AQ86V40 505 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 OR4N4Q8N0Y3 316 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 SCAMP5Q8TAC9 235 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 WDR60Q8WVS4 1066 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 VPS50Q96JG6 964 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 SEMA5BQ9P283 1151 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 NFU1Q9UMS0 254 aa5.14□□□□□ -1.59
CCDC54-201ENST00000261058 M0QZQ0 153 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 RPP40O75818 363 aaKnown RBP5.13□□□□□ -1.59
CCDC54-201ENST00000261058 FAM163BP0C2L3 166 aa5.13□□□□□ -1.59
CCDC54-201ENST00000261058 GYS1P13807 737 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms