RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 PuraP42669 321 aaKnown RBP14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Smyd5Q3TYX3 416 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pdzph1Q8BGR1 1238 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Nup85Q8R480 656 aaKnown RBP14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Wdr98Q8VC42 657 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Fam192aQ91WE2 254 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tlr5Q9JLF7 859 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tspan3Q9QY33 253 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pdpk1Q9Z2A0 559 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Gm28168A0A087WNP1 180 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Oas1eA0A0J9YV76 386 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup10A2BIN1 180 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup14A2CEK7 180 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup19A9C497 187 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup15A9R9W0 180 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup17B5X0G2 180 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup8E9PVW0 235 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup7E9QA79 235 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup6P02762 180 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 AlbP07724 608 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup1P11588 180 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mup2P11589 180 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Fmr1P35922 614 aaKnown RBP14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 TdgP56581 421 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Rasa2P58069 847 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Psmc6P62334 389 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Cdk16Q04735 496 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Fam198aQ3UY90 562 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 HadhQ61425 314 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Rps6ka6Q7TPS0 764 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Eif2b2Q99LD9 351 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Arih1Q9Z1K5 555 aa14.37□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Lipo2D3YY49 398 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pcdh9F8VPK8 1237 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Zfy1P10925 782 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Il12bP43432 335 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Spata5Q3UMC0 893 aaKnown RBP14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Olfr392Q7TRX6 312 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Hmgxb4Q80Y32 594 aaKnown RBP14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Chaf1bQ9D0N7 572 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pou5f2Q9DAC9 329 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tmem59Q9QY73 323 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Kiaa0232Q80U59 1396 aaKnown RBP14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Gm2163Q6PCY5 473 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Zbtb33Q8BN78 671 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Rilpl2Q99LE1 197 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Sbno2Q7TNB8 1349 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Rap1gapA2ALS5 663 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Cyp2t4E9PWV0 503 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Vmn2r104E9Q2J5 860 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Ap3d1O54774 1199 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Odc1P00860 461 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Elk3P41971 409 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 CcnjlQ5SRT8 387 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Clca4aQ6Q473 924 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 AgpsQ8C0I1 645 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Ppp2r3cQ9JK24 453 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Stk25Q9Z2W1 426 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mst1rQ62190 1378 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 A0A1Y7VIU7 259 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Gm12794L7MTS5 483 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Kctd8Q50H33 476 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Klhl17Q6TDP3 640 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 BlmhQ8R016 455 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Syt12Q920N7 421 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Q9CYI0 393 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Sesn3Q9CYP7 492 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Vmn2r77L7N2B7 854 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 DgkqQ6P5E8 934 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Myl12aQ6ZWQ9 172 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 PolnQ7TQ07 864 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Dusp4Q8BFV3 398 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Nr3c2Q8VII8 978 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Pcdhb21Q91V48 774 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tex44Q9DA60 530 aa14.36□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Rims2Q9EQZ7 1530 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Gm3893E9Q1I1 302 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Adam15O88839 864 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Kiaa0319Q5SZV5 1081 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Eif2s1Q6ZWX6 315 aaKnown RBP14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 DcstampQ7TNJ0 470 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mxd3Q80US8 206 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Fbxo38Q8BMI0 1194 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Dnali1Q8BVN8 258 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Zfp277E9Q6D6 583 aaKnown RBP14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Gm3264L7N2C5 238 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Shoc2O88520 582 aaKnown RBP14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tbx1P70323 479 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Slc38a5Q3U1J0 479 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Adam2Q60718 735 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Ugt1a9Q62452 528 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Tmcc2Q80W04 706 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Cops7bQ8BV13 264 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Sgsm3Q8VCZ6 750 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Q9D1F3 157 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Trip6Q9Z1Y4 480 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Drg1P32233 367 aaKnown RBP14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Mmp20P57748 482 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Dnal1Q05A62 190 aa14.35□□□□□ -0.11
Col3a1-201ENSMUST00000087883 Rgs9bpQ148R9 237 aa14.35□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms