RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Plxna3P70208 1872 aa15.33■□□□□ 0.05
Ercc1-201ENSMUST00000003645 Pcdh7A0A0A6YY83 1255 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Apold1E9Q0X2 246 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 F6Y6L6 278 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Man2b1O09159 1013 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 PrlP06879 226 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Tcp1P11983 556 aaKnown RBP15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Gnat1P20612 350 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Tsta3P23591 321 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Rasgrf1P27671 1262 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Cxcl12P40224 93 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Upp1P52624 311 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Dbx1P52950 335 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Trip13Q3UA06 432 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Olfr1198Q7TR12 308 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Vtcn1Q7TSP5 283 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Enpp4Q8BTJ4 456 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Gspt1Q8R050 636 aaKnown RBP15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Ipo4Q8VI75 1082 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Srgap2Q91Z67 1071 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Ttyh1Q9D3A9 450 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Prl2a1Q9JHK0 228 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Scgb2b20Q9JI02 112 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Psmg1Q9JK23 289 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 PignQ9R1S3 931 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 TfebQ9R210 475 aa15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Pacsin2Q9WVE8 486 aaKnown RBP15.33■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Vwa8Q8CC88 1905 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Gm11758A2BEI6 360 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Gm11757A2BEI8 360 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 PtproE9Q612 1226 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 DffaO54786 331 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Tcf3P15806 651 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 CidecP56198 239 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Tmem237Q3V0J1 427 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Afg1lQ3V384 480 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Trim25Q61510 634 aaKnown RBP15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Fcrl5Q68SN8 596 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Snd1Q78PY7 910 aaKnown RBP15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Tubb2aQ7TMM9 445 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Gabbr2Q80T41 940 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Znf365Q8BG89 408 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Efcab14Q8BGQ6 484 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Cdc23Q8BGZ4 597 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Fndc3aQ8BX90 1198 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Fam193aQ8CGI1 1231 aaKnown RBP15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Tubb2bQ9CWF2 445 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 IkbkeQ9R0T8 717 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Tubd1Q9R1K7 455 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Trpc2Q9R244 1172 aa15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Noc2lQ9WV70 747 aaKnown RBP15.32■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Lilra6A0A0B4J1F3 663 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Rpl9-ps6A0A140T8T4 192 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Trim30cD3YVI9 513 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Zfp850J3QPC5 689 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Gm3182K7N6T8 263 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 NoctO35710 429 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Cd160O88875 185 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Gm5571P01639 130 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Gpr3P35413 330 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Rpl9P51410 192 aaKnown RBP15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Timm13P62075 95 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 RalaP63321 206 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 TceancQ3US16 359 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Bdkrb1Q61125 334 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Znf185Q62394 352 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Cypt4Q6P925 153 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 AdalQ80SY6 360 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Q80Y73 168 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Plekhs1Q8BW88 474 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Acad9Q8JZN5 625 aaKnown RBP15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Vmn1r64Q8R2B8 320 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Usp3Q91W36 520 aaKnown RBP15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Rrp1bQ91YK2 724 aaKnown RBP15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Ephx1Q9D379 455 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 3830403N18RikQ9D6C3 208 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Abcg8Q9DBM0 673 aa15.31■□□□□ 0.04
Ercc1-201ENSMUST00000003645 MgamB5THE2 1827 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 IqccA2ADZ8 418 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Fibcd1A2AV25 459 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Ccdc144bE9PVZ3 520 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 March10E9PX79 788 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 4930426L09RikE9Q0N7 123 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Serpinb9O08797 374 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Mucl2P02815 138 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Lmnb2P21619 596 aaKnown RBP15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Vav1P27870 845 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Hdgfl1Q2VPR5 283 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Nr2c1Q505F1 590 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Eif2b4Q61749 524 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Susd6Q8BGE4 302 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Best2Q8BGM5 508 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Taf5Q8C092 801 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Trub1Q8C0D0 338 aaKnown RBP15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Sh3rf3Q8C120 878 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Leng8Q8CBY3 785 aaKnown RBP15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Taf12Q8VE65 161 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Spns2Q91VM4 549 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 AjubaQ91XC0 547 aa15.3■□□□□ 0.04
Ercc1-201ENSMUST00000003645 Ola1Q9CZ30 396 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms