RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TDRD10Q5VZ19 366 aaKnown RBP11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 KIAA1614Q5VZ46 1190 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 LAYNQ6UX15 382 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 VSTM1Q6UX27 236 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 KDM7AQ6ZMT4 941 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 CACTIN-AS1Q8N1I8 211 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 TMEM86AQ8N2M4 240 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 KCNB2Q92953 911 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 HIC2Q96JB3 615 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 SLITRK1Q96PX8 696 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 RUSC1Q9BVN2 902 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 OSGEPQ9NPF4 335 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 STON1Q9Y6Q2 735 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 BOD1L1Q8NFC6 3051 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 CEP192Q8TEP8 1941 aa11.72□□□□□ -0.53
PTP4A1-207ENST00000639568 CITO14578 2027 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 A0A1B0GTQ1 180 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 MYF5P13349 255 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 CTSKP43235 329 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 LHX1P48742 406 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 RAD51AP2Q09MP3 1159 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 DIEXFQ68CQ4 756 aaKnown RBP11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 RINT1Q6NUQ1 792 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 BBS7Q8IWZ6 715 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 EID2Q8N6I1 236 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 DCBLD1Q8N8Z6 715 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 TSC1Q92574 1164 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 BBS2Q9BXC9 721 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 ACE2Q9BYF1 805 aaPredicted RBP11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 WDR35Q9P2L0 1181 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 ORC3Q9UBD5 711 aaPredicted RBP11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 CPSF3Q9UKF6 684 aaKnown RBP11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 SLCO1B1Q9Y6L6 691 aa11.71□□□□□ -0.53
PTP4A1-207ENST00000639568 LRRK2Q5S007 2527 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 A0A0B4J269 797 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 E9PMD0 336 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 K7ENP7 123 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 NPC1O15118 1278 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 FAM189A1O60320 539 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 CACNG3O60359 315 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 IGLV3-19P01714 112 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 MPOP05164 745 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 TYRP14679 529 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 BDNFP23560 247 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 CDC25AP30304 524 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 DGKGP49619 791 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 ERVPABLB-1P60509 514 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 TAF10Q12962 218 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 MAPRE1Q15691 268 aaKnown RBP11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 KCNT1Q5JUK3 1230 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 INO80CQ6PI98 192 aaPredicted RBP11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 C1orf186Q6ZWK4 172 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 CACUL1Q86Y37 369 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 SNX29Q8TEQ0 813 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 ELF4Q99607 663 aaPredicted RBP11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 PKMYT1Q99640 499 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 TTLL2Q9BWV7 592 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 NACA2Q9H009 215 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 C6orf106Q9H6K1 298 aaPredicted RBP11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 L1RE1Q9UN81 338 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 CYP46A1Q9Y6A2 500 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 TSC2P49815 1807 aa11.7□□□□□ -0.54
PTP4A1-207ENST00000639568 FSBPO95073 299 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 IRF1P10914 325 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 CKMT2P17540 419 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 GUCY2CP25092 1073 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 CD27P26842 260 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 ACOT2P49753 483 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 BCAT1P54687 386 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 CDH8P55286 799 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 NOP14P78316 857 aaKnown RBP11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 GABREP78334 506 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 CYP27A1Q02318 531 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 IFRD2Q12894 506 aaPredicted RBP11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 TRIM29Q14134 588 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 E2F5Q15329 346 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 CCDC142Q17RM4 750 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 PRAMEF14Q5SWL7 426 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 CCDC81Q6ZN84 652 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 TPGS1Q6ZTW0 290 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 DIS3L2Q8IYB7 885 aaKnown RBP11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 ADGRF2Q8IZF7 708 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 BIRC7Q96CA5 298 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 THSD1Q9NS62 852 aa11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 LARSQ9P2J5 1176 aaKnown RBP11.69□□□□□ -0.54
PTP4A1-207ENST00000639568 DENND4CQ5VZ89 1909 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 YKT6O15498 198 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 COCHO43405 550 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 SUV39H1O43463 412 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 DTNBO60941 627 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 MT-CO3P00414 261 aa11.68□□□□□ -0.54
PTP4A1-207ENST00000639568 ARRB1P49407 418 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms