RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SLC9A1P19634 815 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 WEE1P30291 646 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 HOXD13P35453 343 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 PSMC2P35998 433 aaKnown RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 STAT1P42224 750 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CENPAP49450 140 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ATP1A2P50993 1020 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 IRAK1P51617 712 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 SNRPFP62306 86 aaKnown RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 FAPQ12884 760 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 NOTUMQ6P988 496 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CNSTQ6PJW8 725 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CCDC149Q6ZUS6 474 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 H2AFVQ71UI9 128 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 EPHX4Q8IUS5 362 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CD302Q8IX05 232 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 TMEM199Q8N511 208 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CNTD1Q8N815 330 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 UTP15Q8TED0 518 aaKnown RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CPB2Q96IY4 423 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 CNDP1Q96KN2 507 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ACO2Q99798 780 aaKnown RBP12.13□□□□□ -0.47
LINC00538-201ENST00000626109 RSAD1Q9HA92 442 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 SMARCAL1Q9NZC9 954 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 TNFSF13BQ9Y275 285 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 USP20Q9Y2K6 914 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 PCDHB9Q9Y5E1 797 aa12.13□□□□□ -0.47
LINC00538-201ENST00000626109 ALPK3Q96L96 1907 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 ARPC4-TTLL3A0A0A6YYG9 625 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 GOLGA6L10A6NI86 522 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 EBAG9O00559 213 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 TGFB1I1O43294 461 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 TOM1L1O75674 476 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 GLI1P08151 1106 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 PBLDP30039 288 aaPredicted RBP12.12□□□□□ -0.47
LINC00538-201ENST00000626109 CA8P35219 290 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 MAGEA9P43362 315 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 CLUL1Q15846 466 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 ANKDD1AQ495B1 522 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 SLFN12LQ6IEE8 588 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 MFSD5Q6N075 450 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 OLFML1Q6UWY5 402 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 C10orf67Q8IYJ2 551 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 SEPT8Q92599 483 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 APBB2Q92870 758 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 LRRC45Q96CN5 670 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 ADPGKQ9BRR6 497 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 OSBPL7Q9BZF2 842 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 MYLK2Q9H1R3 596 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 AGPAT3Q9NRZ7 376 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 KRT82Q9NSB4 513 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 EHD2Q9NZN4 543 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 ANKFY1Q9P2R3 1169 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 TMEM59LQ9UK28 342 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 NFU1Q9UMS0 254 aa12.12□□□□□ -0.47
LINC00538-201ENST00000626109 PGRMC1O00264 195 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 DGKIO75912 1065 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 AKAP3O75969 853 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 ACTN1P12814 892 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 HOXC12P31275 282 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 CARSP49589 748 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 DNA2P51530 1060 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 GNGT1P63211 74 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 ZNF568Q3ZCX4 644 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 SHQ1Q6PI26 577 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 MPZL3Q6UWV2 235 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 PEX26Q7Z412 305 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 DEFB128Q7Z7B8 93 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 IQCKQ8N0W5 287 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 CCDC26Q8TAB7 109 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 POMGNT1Q8WZA1 660 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 SHDQ96IW2 340 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 ZIM3Q96PE6 472 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 YIPF2Q9BWQ6 316 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 ISCUQ9H1K1 167 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 IKZF4Q9H2S9 585 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 PDZD7Q9H5P4 517 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 GCNT4Q9P109 453 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 SH3BGRL2Q9UJC5 107 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 A0A1B0GUA9 196 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 TISP43B9A030 160 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 ANKRD63C9JTQ0 380 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 EIF3HO15372 352 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 DDX3YO15523 660 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 CLDN3O15551 220 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 HOXC11O43248 304 aaPredicted RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 CEP104O60308 925 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 MICAL2O94851 1124 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 SNX4O95219 450 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 CXCL10P02778 98 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 ITGB8P26012 769 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 HOXA11P31270 313 aaPredicted RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 JAM2P57087 298 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 GPNMBQ14956 572 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 GPR158Q5T848 1215 aa12.11□□□□□ -0.47
LINC00538-201ENST00000626109 TWF2Q6IBS0 349 aaKnown RBP12.11□□□□□ -0.47
LINC00538-201ENST00000626109 SLC39A4Q6P5W5 647 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms