RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 BTBD8Q5XKL5 378 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 PRR23BQ6ZRT6 265 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 PIGZQ86VD9 579 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 TRIM59Q8IWR1 403 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 BBS7Q8IWZ6 715 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 KIAA2013Q8IYS2 634 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 USP33Q8TEY7 942 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 SRRTQ9BXP5 876 aaKnown RBP19.16■□□□□ 0.66
VCX3A-203ENST00000612369 TSPAN16Q9UKR8 245 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 SPTBN4Q9H254 2564 aa19.16■□□□□ 0.66
VCX3A-203ENST00000612369 XPO1O14980 1071 aaKnown RBP19.15■□□□□ 0.66
VCX3A-203ENST00000612369 HOXC11O43248 304 aaPredicted RBP19.15■□□□□ 0.66
VCX3A-203ENST00000612369 APODP05090 189 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 RETP07949 1114 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 PAEPP09466 180 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 CCDC192P0DO97 292 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 IRF1P10914 325 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 GRIA2P42262 883 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 BCAT1P54687 386 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 STX17P56962 302 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 HSF5Q4G112 596 aaPredicted RBP19.15■□□□□ 0.66
VCX3A-203ENST00000612369 C10orf120Q5SQS8 335 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 NUDT18Q6ZVK8 323 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 SCD5Q86SK9 330 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 TTC30AQ86WT1 665 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 LMO3Q8TAP4 145 aa19.15■□□□□ 0.66
VCX3A-203ENST00000612369 GREM1O60565 184 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 LRP3O75074 770 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 KAT7O95251 611 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 AFPP02771 609 aaKnown RBP19.14■□□□□ 0.65
VCX3A-203ENST00000612369 CD19P15391 556 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 TNFRSF4P43489 277 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 SLC6A11P48066 632 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 COG7P83436 770 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 GCNT1Q02742 428 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 BST2Q10589 180 aaKnown RBP19.14■□□□□ 0.65
VCX3A-203ENST00000612369 KCNH2Q12809 1159 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 DMC1Q14565 340 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 GOLGA7BQ2TAP0 167 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 PM20D1Q6GTS8 502 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 CEP68Q76N32 757 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 PPM1KQ8N3J5 372 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 EHBP1Q8NDI1 1231 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 GAB3Q8WWW8 586 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 ARHGEF4Q9NR80 690 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 EBF1Q9UH73 591 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 RWDD2AQ9UIY3 292 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 ZNF510Q9Y2H8 683 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.14■□□□□ 0.65
VCX3A-203ENST00000612369 KIAA1549LQ6ZVL6 1849 aa19.14■□□□□ 0.65
VCX3A-203ENST00000612369 MYOFQ9NZM1 2061 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 APBB3O95704 486 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 SETSIPP0DME0 302 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 ID4P47928 161 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 TKTL1P51854 596 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 PDE4CQ08493 712 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 STILQ15468 1287 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 CAMK4Q16566 473 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 C2orf27AQ580R0 203 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 TMEM270Q6UE05 265 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 TMEM25Q86YD3 366 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 ETFBKMTQ8IXQ9 262 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 KCNV2Q8TDN2 545 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 WBP2Q969T9 261 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 LRRC4Q9HBW1 653 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 MARK1Q9P0L2 795 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 WDR35Q9P2L0 1181 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 DEC1Q9P2X7 70 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 MMP17Q9ULZ9 603 aa19.13■□□□□ 0.65
VCX3A-203ENST00000612369 O00370 1275 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 AXIN1O15169 862 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 RPP40O75818 363 aaKnown RBP19.12■□□□□ 0.65
VCX3A-203ENST00000612369 ZBED1O96006 694 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 ANP32AP39687 249 aaKnown RBP19.12■□□□□ 0.65
VCX3A-203ENST00000612369 PXNP49023 591 aaPredicted RBP19.12■□□□□ 0.65
VCX3A-203ENST00000612369 YWHAGP61981 247 aaKnown RBP eCLIP19.12■□□□□ 0.65
VCX3A-203ENST00000612369 SRSF5Q13243 272 aaKnown RBP19.12■□□□□ 0.65
VCX3A-203ENST00000612369 ANO4Q32M45 955 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 LCLAT1Q6UWP7 414 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 CACNA2D4Q7Z3S7 1137 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.12■□□□□ 0.65
VCX3A-203ENST00000612369 C12orf40Q86WS4 652 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 PHTF2Q8N3S3 785 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 KCTD13Q8WZ19 329 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 XPO6Q96QU8 1125 aaKnown RBP19.12■□□□□ 0.65
VCX3A-203ENST00000612369 DCLK3Q9C098 648 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 NUDT5Q9UKK9 219 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 PCDHB4Q9Y5E5 795 aa19.12■□□□□ 0.65
VCX3A-203ENST00000612369 MDM4O15151 490 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 TULP3O75386 442 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 HOXC13P31276 330 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 SEC13P55735 322 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 CNGA2Q16280 664 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 LPAL2Q16609 132 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 PKDCCQ504Y2 493 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 Q6ZNB5 142 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 SCML4Q8N228 414 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 MLKLQ8NB16 471 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 TSTD1Q8NFU3 115 aa19.11■□□□□ 0.65
VCX3A-203ENST00000612369 LOXL4Q96JB6 756 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms