RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 FAM126AQ9BYI3 521 aaPredicted RBP23.47■■□□□ 1.35
GTF2F1-204ENST00000594965 CLIC5Q9NZA1 410 aa23.47■■□□□ 1.35
GTF2F1-204ENST00000594965 GABBR2O75899 941 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 SLC9A1P19634 815 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 BRD2P25440 801 aaKnown RBP23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 ERCC5P28715 1186 aaPredicted RBP23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 SLC6A11P48066 632 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 SLC8A3P57103 927 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 DMWDQ09019 674 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 CNGA2Q16280 664 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 LY6G5CQ5SRR4 150 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 TRIM65Q6PJ69 517 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 HTR3DQ70Z44 454 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 C12orf40Q86WS4 652 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 SUMF1Q8NBK3 374 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 KCTD13Q8WZ19 329 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 ULBP1Q9BZM6 244 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 THAP9Q9H5L6 903 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 DNMT3LQ9UJW3 386 aa23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.46■■□□□ 1.35
GTF2F1-204ENST00000594965 ANTXRLA6NF34 631 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 CHURC1-FNTBB4DL54 471 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 LMNAP02545 664 aaKnown RBP23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 APBA1Q02410 837 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 MESP2Q0VG99 397 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 PPP2R5DQ14738 602 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 C10orf120Q5SQS8 335 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 GJB7Q6PEY0 223 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 RBM43Q6ZSC3 357 aaKnown RBP23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 SLC35F5Q8WV83 523 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 ATRIPQ8WXE1 791 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 EXOC4Q96A65 974 aa23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 UBE2TQ9NPD8 197 aaPredicted RBP23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 POLR3BQ9NW08 1133 aaPredicted RBP23.45■■□□□ 1.34
GTF2F1-204ENST00000594965 ZFHX2Q9C0A1 2572 aaPredicted RBP23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 K7EQS6 105 aa23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 ZBED1O96006 694 aa23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 SETSIPP0DME0 302 aa23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 RALAP11233 206 aa23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 ADH5P11766 374 aa23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 MTIF2P46199 727 aaKnown RBP23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 ADIGQ0VDE8 80 aa23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 TPD52L1Q16890 204 aaPredicted RBP23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 FBXO43Q4G163 708 aa23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 SECISBP2LQ93073 1101 aaKnown RBP23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 LRRC4Q9HBW1 653 aa23.44■■□□□ 1.34
GTF2F1-204ENST00000594965 GTPBP10A4D1E9 387 aaKnown RBP23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 ADH1CP00326 375 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 NRLP54845 237 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 YWHAGP61981 247 aaKnown RBP eCLIP23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 PMF1Q6P1K2 205 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 GBP6Q6ZN66 633 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 Q6ZNB5 142 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 TMEM25Q86YD3 366 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 SFTPA1Q8IWL2 248 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 ARHGAP18Q8N392 663 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 PHTF2Q8N3S3 785 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 SPHK2Q9NRA0 654 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 DACH1Q9UI36 760 aa23.43■■□□□ 1.34
GTF2F1-204ENST00000594965 M0QYV0 167 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 STC2O76061 302 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 CHRM1P11229 460 aaPredicted RBP23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 PON1P27169 355 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 EIF2DP41214 584 aaKnown RBP23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 FNTBP49356 437 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 RGS7P49802 495 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 GAD2Q05329 585 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 EFEMP1Q12805 493 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 STILQ15468 1287 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 MAN2A1Q16706 1144 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 HSP90AA4PQ58FG1 418 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 MIIPQ5JXC2 388 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 TADA2BQ86TJ2 420 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 MIB1Q86YT6 1006 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 ETFBKMTQ8IXQ9 262 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 RPLP0P6Q8NHW5 317 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 CDK5RAP1Q96SZ6 601 aaKnown RBP23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 SIX2Q9NPC8 291 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 RASAL2Q9UJF2 1139 aa23.42■■□□□ 1.34
GTF2F1-204ENST00000594965 MYO18AQ92614 2054 aaKnown RBP23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 A0A0A0MRY4 1105 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 BECN2A8MW95 431 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 HOXC11O43248 304 aaPredicted RBP23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 ATG13O75143 517 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 KLKB1P03952 638 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 KRT5P13647 590 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 LCP1P13796 627 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 HOXA6P31267 233 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 GOLGA8FQ08AF8 430 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 GOLGA8DPQ0D2H9 430 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 EXOC3L4Q17RC7 722 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 CT47A1Q5JQC4 288 aaPredicted RBP23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 DPY19L2P1Q6NXN4 242 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 ENOSF1Q7L5Y1 443 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 FAM114A1Q8IWE2 563 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 SCML4Q8N228 414 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 PNKPQ96T60 521 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 EPC1Q9H2F5 836 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 ACP6Q9NPH0 428 aa23.41■■□□□ 1.34
GTF2F1-204ENST00000594965 CNGB3Q9NQW8 809 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms