RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 CCDC85BQ15834 202 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 IFI16Q16666 785 aaKnown RBP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 PUS10Q3MIT2 529 aaKnown RBP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 C2CD6Q53TS8 623 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 PPP1R15BQ5SWA1 713 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 HECTD3Q5T447 861 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 SCD5Q86SK9 330 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 TMC8Q8IU68 726 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 HS6ST3Q8IZP7 471 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 FEZF2Q8TBJ5 459 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 FNIP1Q8TF40 1166 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 RNF139Q8WU17 664 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 ZNF830Q96NB3 372 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 ZNF334Q9HCZ1 680 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 WDR6Q9NNW5 1121 aaKnown RBP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 GMIPQ9P107 970 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 MYO1AQ9UBC5 1043 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 TMEM59LQ9UK28 342 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 STAP1Q9ULZ2 295 aa11.17□□□□□ -0.62
SMAD4-214ENST00000592186 MRPS23Q9Y3D9 190 aaKnown RBP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 ZFP37Q9Y6Q3 630 aaPredicted RBP11.17□□□□□ -0.62
SMAD4-214ENST00000592186 A0A1W2PQH9 124 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 TCRBV5S1A1TA0A578 114 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 TMEM191CA6NGB0 347 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 MYO1FO00160 1098 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 KRT86O43790 486 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 TBX10O75333 385 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 MTA2O94776 668 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 F9P00740 461 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 NCAM1P13591 858 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 RARGP13631 454 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 PDGFRAP16234 1089 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 FSHRP23945 695 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 GBP1P32455 592 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 RFC1P35251 1148 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 ATP5C1P36542 298 aaKnown RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 ARHGAP25P42331 645 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 HADHBP55084 474 aaKnown RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 RNASE9P60153 205 aaKnown RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 DLX2Q07687 328 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 GAREM2Q75VX8 874 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 RSRC2Q7L4I2 434 aaKnown RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 BHLHA9Q7RTU4 235 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 RNF10Q8N5U6 811 aaKnown RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 SMRP1Q8NCR6 262 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 SLC35G2Q8TBE7 412 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 CLEC4CQ8WTT0 213 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 RFFLQ8WZ73 363 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 KHSRPQ92945 711 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■■□ 19.6
SMAD4-214ENST00000592186 SLC2A13Q96QE2 648 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 DDX23Q9BUQ8 820 aaKnown RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 NUP85Q9BW27 656 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 NACA2Q9H009 215 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 KCNF1Q9H3M0 494 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 TASP1Q9H6P5 420 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 UBE2ZQ9H832 354 aaPredicted RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 HCFC1R1Q9NWW0 138 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 GDE1Q9NZC3 331 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 CTTNBP2NLQ9P2B4 639 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 TJP2Q9UDY2 1190 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 IP6K2Q9UHH9 426 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 DNMT3LQ9UJW3 386 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 FAM50BQ9Y247 325 aa11.16□□□□□ -0.62
SMAD4-214ENST00000592186 REXO2Q9Y3B8 237 aaKnown RBP11.16□□□□□ -0.62
SMAD4-214ENST00000592186 TRAV19A0A0A6YYK7 116 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 A0A1W2PRU2 124 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 GOLGA6L9A6NEM1 432 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 TLR5O60602 858 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 DAB1O75553 588 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 FYNP06241 537 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 HDCP19113 662 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 WEE1P30291 646 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 SDC4P31431 198 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 PTPN9P43378 593 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 NOP2P46087 812 aaKnown RBP11.15□□□□□ -0.62
SMAD4-214ENST00000592186 ZNF143P52747 638 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-214ENST00000592186 MTA1Q13330 715 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 PIGHQ14442 188 aaPredicted RBP11.15□□□□□ -0.62
SMAD4-214ENST00000592186 TAF5Q15542 800 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 SLC25A52Q3SY17 297 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 DCAF6Q58WW2 860 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 PRSS36Q5K4E3 855 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 C10orf120Q5SQS8 335 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 MSANTD2Q6P1R3 559 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 PHLDB2Q86SQ0 1253 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 TMEM150AQ86TG1 271 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 DEFB106AQ8N104 65 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 ACRBPQ8NEB7 543 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 NDRG1Q92597 394 aaKnown RBP11.15□□□□□ -0.62
SMAD4-214ENST00000592186 NT5C3BQ969T7 300 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 DESI2Q9BSY9 194 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 CNPY3Q9BT09 278 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 APOL5Q9BWW9 433 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 PACSIN1Q9BY11 444 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 NMUR1Q9HB89 426 aa11.15□□□□□ -0.62
SMAD4-214ENST00000592186 METTL5Q9NRN9 209 aaKnown RBP11.15□□□□□ -0.62
SMAD4-214ENST00000592186 PPP2R2CQ9Y2T4 447 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms