RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TMCO1Q9UM00 188 aa6.52□□□□□ -1.37
SMAD4-212ENST00000591126 MAPRE3Q9UPY8 281 aa6.52□□□□□ -1.37
SMAD4-212ENST00000591126 FAM86B1E9PN63 330 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PSMD12O00232 456 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CIB2O75838 187 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 FGF18O76093 207 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 FAM86B2P0C5J1 330 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CXCR2P25025 360 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SMAD3P84022 425 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SP2Q02086 613 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CAMK2GQ13555 558 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 TP53BP2Q13625 1128 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PLCL1Q15111 1095 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CNGA2Q16280 664 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 ITPRIPL2Q3MIP1 535 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SERINC5Q86VE9 423 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 UBALD2Q8IYN6 164 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PHACTR4Q8IZ21 702 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CABS1Q96KC9 395 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 LRRC37BQ96QE4 947 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CDT1Q9H211 546 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 EPC1Q9H2F5 836 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 XAB2Q9HCS7 855 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 ANO9A1A5B4 782 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 GRID2IPA4D2P6 1211 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 INPPL1O15357 1258 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PSTPIP1O43586 416 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 KRT16P08779 473 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 MYBP10242 640 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 RARGP13631 454 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CHRNA3P32297 505 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SERPINB9P50453 376 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 ARMC12Q5T9G4 340 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 ANKS1BQ7Z6G8 1248 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 OR6P1Q8NGX9 317 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 UBE2E3Q969T4 207 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PI4K2AQ9BTU6 479 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 TASP1Q9H6P5 420 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 EML4Q9HC35 981 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 ELOVL2Q9NXB9 296 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 LIMA1Q9UHB6 759 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 GTF3C4Q9UKN8 822 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 OGDHLQ9ULD0 1010 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SCML1Q9UN30 329 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CACNA1FO60840 1977 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 MYOM1P52179 1685 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 FAM187AA6NFU0 413 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 YKT6O15498 198 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 EIF4A3P38919 411 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SNX1Q13596 522 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 HNRNPDQ14103 355 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 TTC30BQ8N4P2 665 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 ANKRD52Q8NB46 1076 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 COLGALT1Q8NBJ5 622 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 REPS1Q96D71 796 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 KLHL5Q96PQ7 755 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PRPF18Q99633 342 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 YIPF2Q9BWQ6 316 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 VCXQ9H320 206 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 COPS7BQ9H9Q2 264 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 NHEJ1Q9H9Q4 299 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 MRPL40Q9NQ50 206 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 TRMT13Q9NUP7 481 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 GABRQQ9UN88 632 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PCDHA13Q9Y5I0 950 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 RBM47A0AV96 593 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 LILRB3O75022 631 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 OR56A5P0C7T3 313 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CYP11B1P15538 503 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PCSK2P16519 638 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 RASSF2P50749 326 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SUOXP51687 545 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 EIF3BP55884 814 aaKnown RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 FBXW4P57775 412 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CDR2Q01850 454 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 IMPG1Q17R60 797 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SETMARQ53H47 684 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 MARC1Q5VT66 337 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 ACAD10Q6JQN1 1059 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CCDC62Q6P9F0 684 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 IL27RAQ6UWB1 636 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SH3BP5LQ7L8J4 393 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 MYLK4Q86YV6 388 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-212ENST00000591126 FLCNQ8NFG4 579 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 BPIFB1Q8TDL5 484 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 PYROXD1Q8WU10 500 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CLEC4DQ8WXI8 215 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CAPZA3Q96KX2 299 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 FAM167BQ9BTA0 163 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 SENP2Q9HC62 589 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 CISHQ9NSE2 258 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 KBTBD4Q9NVX7 518 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 DYRK1BQ9Y463 629 aa6.51□□□□□ -1.37
SMAD4-212ENST00000591126 EFCAB8A8MWE9 144 aa6.5□□□□□ -1.37
SMAD4-212ENST00000591126 ZNF623O75123 536 aa6.5□□□□□ -1.37
SMAD4-212ENST00000591126 TRIM49P0CI25 452 aa6.5□□□□□ -1.37
SMAD4-212ENST00000591126 TRIM49CP0CI26 452 aa6.5□□□□□ -1.37
SMAD4-212ENST00000591126 AMD1P17707 334 aa6.5□□□□□ -1.37
SMAD4-212ENST00000591126 GUCY1A2P33402 732 aa6.5□□□□□ -1.37
SMAD4-212ENST00000591126 KRT20P35900 424 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms