RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SLC8B1Q6J4K2 584 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 SCYL2Q6P3W7 929 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 TTC27Q6P3X3 843 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 MAATS1Q7Z4T9 603 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 ATAD1Q8NBU5 361 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 KCTD6Q8NC69 237 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 RIN2Q8WYP3 895 aaPredicted RBP11.91□□□□□ -0.5
SMAD4-205ENST00000588745 MAGOHBQ96A72 148 aaKnown RBP11.91□□□□□ -0.5
SMAD4-205ENST00000588745 SNRNP25Q9BV90 132 aaKnown RBP11.91□□□□□ -0.5
SMAD4-205ENST00000588745 TRIM62Q9BVG3 475 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 LRRC19Q9H756 370 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 RRN3Q9NYV6 651 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 NAALADL1Q9UQQ1 740 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 EFR3BQ9Y2G0 817 aa11.91□□□□□ -0.5
SMAD4-205ENST00000588745 TTI1O43156 1089 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 ERLIN1O75477 346 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 ZMYND10O75800 440 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 TJP3O95049 919 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 VNN2O95498 520 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 CD48P09326 243 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 TNFRSF8P28908 595 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 PPM1AP35813 382 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 COILP38432 576 aaPredicted RBP11.9□□□□□ -0.5
SMAD4-205ENST00000588745 GLUD2P49448 558 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 GPR15P49685 360 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 ATXN1P54253 815 aaKnown RBP11.9□□□□□ -0.5
SMAD4-205ENST00000588745 EPHB4P54760 987 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 CDH6P55285 790 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 PITX1P78337 314 aaPredicted RBP11.9□□□□□ -0.5
SMAD4-205ENST00000588745 DR1Q01658 176 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 ROR1Q01973 937 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 DSG1Q02413 1049 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 ADCY2Q08462 1091 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 IFRD2Q12894 506 aaPredicted RBP11.9□□□□□ -0.5
SMAD4-205ENST00000588745 KRT81Q14533 505 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 PDK2Q15119 407 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 DDR2Q16832 855 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 TMEM240Q5SV17 173 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 KAZNQ674X7 775 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 KIAA1841Q6NSI8 718 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 CCDC137Q6PK04 289 aaKnown RBP11.9□□□□□ -0.5
SMAD4-205ENST00000588745 RNF19BQ6ZMZ0 732 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 BBS12Q6ZW61 710 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 BEND5Q7L4P6 421 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 TTC9BQ8N6N2 239 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 SCAMP5Q8TAC9 235 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 C1orf54Q8WWF1 131 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 PGAP3Q96FM1 320 aaPredicted RBP11.9□□□□□ -0.5
SMAD4-205ENST00000588745 DCLK3Q9C098 648 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 PLEKHA4Q9H4M7 779 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 GDF3Q9NR23 364 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 AAASQ9NRG9 546 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 HOMER3Q9NSC5 361 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 GPATCH2LQ9NWQ4 482 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 SPG21Q9NZD8 308 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 CALCOCO1Q9P1Z2 691 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 PCYOX1Q9UHG3 505 aa11.9□□□□□ -0.5
SMAD4-205ENST00000588745 WDR27A2RRH5 827 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 FAM187AA6NFU0 413 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 ZSCAN5CA6NGD5 496 aaPredicted RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 M0QYT0 321 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 URODP06132 367 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 HAPLN1P10915 354 aaPredicted RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 NCAM1P13591 858 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 PTGIRP43119 386 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 YWHAGP61981 247 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 GUCY2DQ02846 1103 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 DEUP1Q05D60 604 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 DPYSL3Q14195 570 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 DPYSL2Q16555 572 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 CA9Q16790 459 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 MGAT5BQ3V5L5 792 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 ZC3H12AQ5D1E8 599 aaKnown RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 ERMARDQ5T6L9 678 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 BSPRYQ5W0U4 402 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 DDX53Q86TM3 631 aaKnown RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 FAM131BQ86XD5 332 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 VSIG1Q86XK7 387 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 JAMLQ86YT9 394 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 MAP7D3Q8IWC1 876 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 IFT20Q8IY31 132 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 NUP93Q8N1F7 819 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 FIBCD1Q8N539 461 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 SLC7A14Q8TBB6 771 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 FAM71BQ8TC56 605 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 HNRNPLLQ8WVV9 542 aaKnown RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 ATG4AQ8WYN0 398 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 SLC9A7Q96T83 725 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 SEPT5Q99719 369 aaPredicted RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 ZNF670Q9BS34 389 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 CALN1Q9BXU9 219 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 CRISPLD1Q9H336 500 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 PCDH18Q9HCL0 1135 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
SMAD4-205ENST00000588745 RASAL2Q9UJF2 1139 aa11.89□□□□□ -0.51
SMAD4-205ENST00000588745 AP4E1Q9UPM8 1137 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms