RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 FOXN3O00409 490 aaPredicted RBP19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 NCAM2O15394 837 aa19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 RALAP11233 206 aa19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 GPD2P43304 727 aa19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 COPB1P53618 953 aaKnown RBP19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 NHLH1Q02575 133 aa19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 ANGPT1Q15389 498 aa19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 CLEC4CQ8WTT0 213 aa19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 FUCA2Q9BTY2 467 aa19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 FBRSL1Q9HCM7 1045 aaKnown RBP19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 FAM86C1Q9NVL1 165 aa19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 LIMA1Q9UHB6 759 aaKnown RBP19.6■□□□□ 0.73
PPP4R1-215ENST00000580182 E2F8A0AVK6 867 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 YJEFN3A6XGL0 299 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 E7ENQ6 273 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 GREM1O60565 184 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 NFATC1O95644 943 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 CYP17A1P05093 508 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 ZNF18P17022 549 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 CLCN1P35523 988 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 RPS9P46781 194 aaKnown RBP19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 GALK1P51570 392 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 DAOAP59103 153 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 EFEMP1Q12805 493 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 RAPGEF1Q13905 1077 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 GAB4Q2WGN9 574 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 KLHDC10Q6PID8 442 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 MIB1Q86YT6 1006 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 C1orf210Q8IVY1 113 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 BBS7Q8IWZ6 715 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 SIX6OS1Q8N1H7 587 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 PHOX2BQ99453 314 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 NAA15Q9BXJ9 866 aaKnown RBP19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 SPATA6Q9NWH7 488 aaPredicted RBP19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 CYTH4Q9UIA0 394 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 RASAL2Q9UJF2 1139 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 DNMT3LQ9UJW3 386 aa19.59■□□□□ 0.73
PPP4R1-215ENST00000580182 SYCE3A1L190 88 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 MED7O43513 233 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 ATP1A3P13637 1013 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 MTAPQ13126 283 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 GAS6Q14393 721 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 DRAP1Q14919 205 aaPredicted RBP19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 DHCR24Q15392 516 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 BTBD8Q5XKL5 378 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 FSTL4Q6MZW2 842 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 C1orf228Q6PIY5 440 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 RHBDF2Q6PJF5 856 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 Q6ZS52 159 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 APTXQ7Z2E3 356 aaKnown RBP19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 DHX40Q8IX18 779 aaKnown RBP19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 MAML2Q8IZL2 1156 aaPredicted RBP19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 ARHGAP18Q8N392 663 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 ZNF276Q8N554 614 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 KIAA1958Q8N8K9 716 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 EDEM1Q92611 657 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 HSFY1Q96LI6 401 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 MIS12Q9H081 205 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 CNGB3Q9NQW8 809 aa19.58■□□□□ 0.72
PPP4R1-215ENST00000580182 TRDMT1O14717 391 aaKnown RBP19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 SLC9A3R1O14745 358 aaPredicted RBP19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 HMBSP08397 361 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 UCHL3P15374 230 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 CDK11BP21127 795 aaKnown RBP19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 NR1H3Q13133 447 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 CCINQ13939 588 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 TMEM196Q5HYL7 178 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 BSPRYQ5W0U4 402 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 TADA2BQ86TJ2 420 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 SLC47A2Q86VL8 602 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 FAM71AQ8IYT1 594 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 ATOH1Q92858 354 aaPredicted RBP19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 P2RY13Q9BPV8 354 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 BPIFA3Q9BQP9 254 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 NAT10Q9H0A0 1025 aaKnown RBP19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 GANQ9H2C0 597 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 CHRDQ9H2X0 955 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 ST7Q9NRC1 585 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 TBC1D14Q9P2M4 693 aa19.57■□□□□ 0.72
PPP4R1-215ENST00000580182 EPHB6O15197 1021 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 STC2O76061 302 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 EGFP01133 1207 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 TPM2P07951 284 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 PLA2G5P39877 138 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 OPRD1P41143 372 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 MAGEA9P43362 315 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 RPL34P49207 117 aaKnown RBP19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 PTK2Q05397 1052 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 LY6G5CQ5SRR4 150 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 FKBP15Q5T1M5 1219 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 HTR3DQ70Z44 454 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 RSRC2Q7L4I2 434 aaKnown RBP19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 PASD1Q8IV76 773 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 SCUBE3Q8IX30 993 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 SCML4Q8N228 414 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 WDTC1Q8N5D0 677 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 EZH1Q92800 747 aaPredicted RBP19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 FAM122AQ96E09 287 aa19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 CDK5RAP1Q96SZ6 601 aaKnown RBP19.56■□□□□ 0.72
PPP4R1-215ENST00000580182 PLCB1Q9NQ66 1216 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms