RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SCN4BQ8IWT1 228 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 PPM1KQ8N3J5 372 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 C2orf15Q8WU43 125 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 TFAP2BQ92481 460 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 FGF13Q92913 245 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 RSPRY1Q96DX4 576 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 FUBP3Q96I24 572 aaKnown RBP eCLIP10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 NT5C1BQ96P26 610 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 BPIFA3Q9BQP9 254 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 GPR88Q9GZN0 384 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 EPHX3Q9H6B9 360 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 LIMA1Q9UHB6 759 aaKnown RBP10.04□□□□□ -0.8
NPLOC4-219ENST00000576713 HHLA1C9JL84 531 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 PI4K2BG5E9Z4 385 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 NOL4O94818 638 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 DMDP11532 3685 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 PCSK2P16519 638 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 FCARP24071 287 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 MAPK1P28482 360 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 ALDH1A3P47895 512 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 TUFMP49411 452 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 ZNF165P49910 485 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 ZNF132P52740 706 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 COPB1P53618 953 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 EPHB3P54753 998 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 CYP4F8P98187 520 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 CTBSQ01459 385 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 TEAD2Q15562 447 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 TRIP4Q15650 581 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 ELMSAN1Q6PJG2 1045 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 C4orf50Q6ZRC1 276 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 CLEC20AQ6ZU45 233 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 TTC30AQ86WT1 665 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 SCAMP5Q8TAC9 235 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 FGF14Q92915 247 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 MCRS1Q96EZ8 462 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 TMEM176AQ96HP8 235 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 ZNF512Q96ME7 567 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 CITED4Q96RK1 184 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 NT5C1AQ9BXI3 368 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 RBCK1Q9BYM8 510 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 UBE2TQ9NPD8 197 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 AVENQ9NQS1 362 aaPredicted RBP10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 KRT82Q9NSB4 513 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 MUTYHQ9UIF7 546 aa10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 MRPS23Q9Y3D9 190 aaKnown RBP10.03□□□□□ -0.8
NPLOC4-219ENST00000576713 GTPBP10A4D1E9 387 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 TEX33O43247 280 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 RPLP1P05386 114 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 LAMP2P13473 410 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 GABRR2P28476 465 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 GBP2P32456 591 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 GRIK1P39086 918 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 MAP3K7CLP57077 242 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 GCNT1Q02742 428 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 SMARCB1Q12824 385 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 EXOC3L4Q17RC7 722 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 IQCEQ6IPM2 695 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 TMEM270Q6UE05 265 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 PARM1Q6UWI2 310 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 GBP6Q6ZN66 633 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 PDZD4Q76G19 769 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 FAM114A1Q8IWE2 563 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 ZDHHC14Q8IZN3 488 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 TDRD5Q8NAT2 981 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 RBBP8NLQ8NC74 664 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 CCDC150Q8NCX0 1101 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 RIN3Q8TB24 985 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 JAKMIP2Q96AA8 810 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 CYFIP2Q96F07 1278 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 FAXDC2Q96IV6 333 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 TNIP3Q96KP6 325 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 C8orf48Q96LL4 319 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 LRRC3BQ96PB8 259 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 SLC22A12Q96S37 553 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 HNRNPABQ99729 332 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 MED10Q9BTT4 135 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 NAA15Q9BXJ9 866 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 PLA2G2FQ9BZM2 168 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 GANQ9H2C0 597 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 CSNK1G1Q9HCP0 422 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 ASAH2Q9NR71 780 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 EPS15L1Q9UBC2 864 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 APEX2Q9UBZ4 518 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 CDH7Q9ULB5 785 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 MAGED2Q9UNF1 606 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 CNTN6Q9UQ52 1028 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 SIK3Q9Y2K2 1263 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 FHOD1Q9Y613 1164 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 PATJQ8NI35 1801 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 OBSL1O75147 1896 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 DOCK8Q8NF50 2099 aa10.02□□□□□ -0.81
NPLOC4-219ENST00000576713 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 LRRC10BA6NIK2 292 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 ANHXE9PGG2 379 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 NARSO43776 548 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 PRAMEF12O95522 483 aa10.01□□□□□ -0.81
NPLOC4-219ENST00000576713 PTMSP20962 102 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms