RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ZNF365Q70YC5 407 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 ANKRD33Q7Z3H0 272 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 C11orf96Q7Z7L8 435 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 DPP9Q86TI2 863 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 KLHDC9Q8NEP7 349 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 BRIX1Q8TDN6 353 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 PMM1Q92871 262 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 BORCS6Q96GS4 357 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 RPS6KC1Q96S38 1066 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 SPATC1LQ9H0A9 340 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 MEGF9Q9H1U4 602 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 DHX36Q9H2U1 1008 aaKnown RBP6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 PLA2G3Q9NZ20 509 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 THEGQ9P2T0 379 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 SLC23A1Q9UHI7 598 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 ADAMTS20P59510 1910 aa6.82□□□□□ -1.32
HERPUD1-208ENST00000563911 PNMA6EA0A0J9YXQ4 647 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 B5MCH6 92 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 CTAGE5O15320 804 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 PJA2O43164 708 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 PHGDHO43175 533 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 SNAI1O95863 264 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 SBK3P0C264 359 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 UBTFL1P0CB47 393 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 GNAT2P19087 354 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 CLRN1P58418 232 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 MVPQ14764 893 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 NAA16Q6N069 864 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 MFSD5Q6N075 450 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 APOA5Q6Q788 366 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 SEM1Q6ZVN7 128 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 PPP1R3BQ86XI6 285 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 MIGA1Q8NAN2 632 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 SLC44A5Q8NCS7 719 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 PARD3BQ8TEW8 1205 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 ANKS1AQ92625 1134 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 TNPO1Q92973 898 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 CPPED1Q9BRF8 314 aaPredicted RBP6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 C1orf43Q9BWL3 253 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 NUP62CLQ9H1M0 184 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 MRPL46Q9H2W6 279 aaKnown RBP6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 ZCCHC4Q9H5U6 513 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 ATP6V0A4Q9HBG4 840 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 SLAMF7Q9NQ25 335 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 XPNPEP3Q9NQH7 507 aa6.81□□□□□ -1.32
HERPUD1-208ENST00000563911 FOCADQ5VW36 1801 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 A0A0G2JMZ2 1700 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 TBKBP1A7MCY6 615 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 PRR5-ARHGAP8B1AHC4 643 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 TRANK1O15050 2925 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 STRNO43815 780 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 CYP2D6P10635 497 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 KITP10721 976 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 CYP2C18P33260 490 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 ACLYP53396 1101 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 CCNA1P78396 465 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 GSTO1P78417 241 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 GABPAQ06546 454 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 COG2Q14746 738 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 POLD3Q15054 466 aaPredicted RBP6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 BMT2Q1RMZ1 405 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 TMEM63BQ5T3F8 832 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 FAM90A1Q86YD7 464 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 IL17RDQ8NFM7 739 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 KCNC2Q96PR1 638 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 NAA15Q9BXJ9 866 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 PACSIN1Q9BY11 444 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 C22orf23Q9BZE7 217 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 LRRC27Q9C0I9 530 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 FBXO28Q9NVF7 368 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 SIDT1Q9NXL6 827 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 RTEL1Q9NZ71 1219 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 PPP4R1LQ9P1A2 415 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 DDX49Q9Y6V7 483 aaKnown RBP6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 ZNF236Q9UL36 1845 aa6.8□□□□□ -1.32
HERPUD1-208ENST00000563911 WDFY4Q6ZS81 3184 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 GRIN2DO15399 1336 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 SYNRGQ9UMZ2 1314 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 OTOL1A6NHN0 477 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 POMCP01189 267 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 AHSGP02765 367 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 GNAI3P08754 354 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 INHBBP09529 407 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 MYF5P13349 255 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 SLC7A1P30825 629 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 MSX2P35548 267 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 PIK3CGP48736 1102 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 DUSP8Q13202 625 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 MTX1Q13505 466 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 CERKLQ49MI3 558 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 UBXN11Q5T124 520 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 CCDC129Q6ZRS4 1044 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 FRMD5Q7Z6J6 570 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 ELOA2Q8IYF1 753 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 SPICE1Q8N0Z3 855 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 CELF5Q8N6W0 485 aaKnown RBP6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 NLGN4YQ8NFZ3 816 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 IL31RAQ8NI17 732 aa6.79□□□□□ -1.32
HERPUD1-208ENST00000563911 TFAP2CQ92754 450 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms