RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 NECAB3Q96P71 396 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 LENG8Q96PV6 779 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 LMF1Q96S06 567 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 SMC6Q96SB8 1091 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 DMRTA2Q96SC8 542 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 SECISBP2Q96T21 854 aaKnown RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 AIFM2Q9BRQ8 373 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM129AQ9BZQ8 928 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CEP44Q9C0F1 390 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 MIR1-1HGQ9H1L0 117 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CARD9Q9H257 536 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 TMEM60Q9H2L4 133 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 EPB41L4BQ9H329 900 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ZMAT3Q9HA38 289 aaKnown RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 PARVBQ9HBI1 364 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 RPRD1BQ9NQG5 326 aaKnown RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM114A2Q9NRY5 505 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 POLR3BQ9NW08 1133 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 TRPM5Q9NZQ8 1165 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 ZSWIM5Q9P217 1185 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 CFAP97Q9P2B7 532 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 GRHPRQ9UBQ7 328 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 TTC7AQ9ULT0 858 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 MYO6Q9UM54 1294 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 PCDHB4Q9Y5E5 795 aa4.73□□□□□ -1.65
HMGB3P26-201ENST00000560051 USP19O94966 1318 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 NCOA3Q9Y6Q9 1424 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TARM1B6A8C7 271 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 H0Y8G0 127 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TAF4O00268 1085 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ANGPT2O15123 496 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TO15178 435 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FANCGO15287 622 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FFAR2O15552 330 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ZW10O43264 779 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PRODHO43272 600 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 B4GALT4O60513 344 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PHF2O75151 1096 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SMIM24O75264 130 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TMCC1O94876 653 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 KLHL2O95198 593 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CSF2P04141 144 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FESP07332 822 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ABCB1P08183 1280 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CYP3A4P08684 503 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 DLDP09622 509 aaKnown RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 GAAP10253 952 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ACRP10323 421 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 RALAP11233 206 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 VAV1P15498 845 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PORP16435 677 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 KRT4P19013 534 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PDCP20941 246 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 IL32P24001 234 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CBX5P45973 191 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FXR1P51114 621 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SCNN1GP51170 649 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 MRPL12P52815 198 aaKnown RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 RAD23AP54725 363 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CARD18P57730 90 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 IL2P60568 153 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TSPAN5P62079 268 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PPP2R2AP63151 447 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PRKCZQ05513 592 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 NIPAL4Q0D2K0 466 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ASPHQ12797 758 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FSTL1Q12841 308 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SV2CQ496J9 727 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FLYWCH1Q4VC44 716 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM26FQ5R3K3 315 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ATAT1Q5SQI0 421 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 C12orf60Q5U649 245 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 RASIP1Q5U651 963 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PIK3R6Q5UE93 754 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CDKAL1Q5VV42 579 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 BORAQ6PGQ7 559 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 PET117Q6UWS5 81 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ATG14Q6ZNE5 492 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 UBE2R2Q712K3 238 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 FAM214BQ7L5A3 538 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 NLRC3Q7RTR2 1065 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TAS2R42Q7RTR8 314 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 MAMDC2Q7Z304 686 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 ARHGAP22Q7Z5H3 698 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 KIF18BQ86Y91 864 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CEP97Q8IW35 865 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TXLNBQ8N3L3 684 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 TCP11L2Q8N4U5 519 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 MRPL43Q8N983 215 aaKnown RBP4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CLHC1Q8NHS4 586 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 B4GALNT2Q8NHY0 566 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SLC22A8Q8TCC7 542 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 CALML6Q8TD86 181 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 GPBAR1Q8TDU6 330 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 IP6K1Q92551 441 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 RFKQ969G6 155 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SAAL1Q96ER3 474 aa4.72□□□□□ -1.65
HMGB3P26-201ENST00000560051 SNX27Q96L92 541 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms