RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 OTUB2Q96DC9 234 aa18.11■□□□□ 0.49
GPHN-211ENST00000556020 KLF16Q9BXK1 252 aaPredicted RBP18.11■□□□□ 0.49
GPHN-211ENST00000556020 TPSD1Q9BZJ3 242 aa18.11■□□□□ 0.49
GPHN-211ENST00000556020 ARRDC1-AS1Q9H2J1 176 aa18.11■□□□□ 0.49
GPHN-211ENST00000556020 DLL3Q9NYJ7 618 aa18.11■□□□□ 0.49
GPHN-211ENST00000556020 LSM7Q9UK45 103 aaKnown RBP18.11■□□□□ 0.49
GPHN-211ENST00000556020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.1■□□□□ 0.49
GPHN-211ENST00000556020 BIN1O00499 593 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 DCLK1O15075 740 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 GADD45BO75293 160 aaPredicted RBP18.1■□□□□ 0.49
GPHN-211ENST00000556020 KLF8O95600 359 aaPredicted RBP18.1■□□□□ 0.49
GPHN-211ENST00000556020 FOXK2Q01167 660 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 GOLGA8FQ08AF8 430 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 GOLGA8DPQ0D2H9 430 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 CCDC40Q4G0X9 1142 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 EMC10Q5UCC4 262 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 ANO7Q6IWH7 933 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 TMEM25Q86YD3 366 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 MIB1Q86YT6 1006 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 TXNDC5Q8NBS9 432 aaKnown RBP18.1■□□□□ 0.49
GPHN-211ENST00000556020 SLC35C1Q96A29 364 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 GTPBP4Q9BZE4 634 aaKnown RBP18.1■□□□□ 0.49
GPHN-211ENST00000556020 PNPLA8Q9NP80 782 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 CYLDQ9NQC7 956 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 SPHK2Q9NRA0 654 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.1■□□□□ 0.49
GPHN-211ENST00000556020 MMP17Q9ULZ9 603 aa18.1■□□□□ 0.49
GPHN-211ENST00000556020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.09■□□□□ 0.49
GPHN-211ENST00000556020 TULP3O75386 442 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 CD19P15391 556 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 GBP1P32455 592 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 EIF2DP41214 584 aaKnown RBP18.09■□□□□ 0.49
GPHN-211ENST00000556020 GRIA2P42262 883 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 CUL2Q13617 745 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 CSRP2Q16527 193 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 GOLGA7BQ2TAP0 167 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 PRR23CQ6ZRP0 262 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 TPGS1Q6ZTW0 290 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 SCD5Q86SK9 330 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 DHTKD1Q96HY7 919 aaPredicted RBP18.09■□□□□ 0.49
GPHN-211ENST00000556020 DEC1Q9P2X7 70 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 RASAL2Q9UJF2 1139 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 DNMT3LQ9UJW3 386 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
GPHN-211ENST00000556020 CTNND2Q9UQB3 1225 aa18.09■□□□□ 0.49
GPHN-211ENST00000556020 CACNA1AO00555 2505 aa18.08■□□□□ 0.49
GPHN-211ENST00000556020 TBC1D3BA6NDS4 549 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 NEDD8-MDP1E9PL57 170 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 TRIM24O15164 1050 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 LRP3O75074 770 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 HMBSP08397 361 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 RALAP11233 206 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 ATXN1P54253 815 aaKnown RBP18.08■□□□□ 0.48
GPHN-211ENST00000556020 SLC8A3P57103 927 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 MRPS21P82921 87 aaKnown RBP18.08■□□□□ 0.48
GPHN-211ENST00000556020 EFEMP1Q12805 493 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 ARHGAP17Q68EM7 881 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 TMEM92Q6UXU6 159 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 HTR3DQ70Z44 454 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 CCDC186Q7Z3E2 898 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 PIGZQ86VD9 579 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 NELFBQ8WX92 580 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 BHMTQ93088 406 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 FAXDC2Q96IV6 333 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 BBS2Q9BXC9 721 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 METTL14Q9HCE5 456 aaKnown RBP18.08■□□□□ 0.48
GPHN-211ENST00000556020 EBF1Q9UH73 591 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 COQ4Q9Y3A0 265 aa18.08■□□□□ 0.48
GPHN-211ENST00000556020 MED19A0JLT2 244 aaPredicted RBP18.07■□□□□ 0.48
GPHN-211ENST00000556020 SGK1O00141 431 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 HOXC11O43248 304 aaPredicted RBP18.07■□□□□ 0.48
GPHN-211ENST00000556020 GREM1O60565 184 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 EPN2O95208 641 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 HNRNPLP14866 589 aaKnown RBP eCLIP18.07■□□□□ 0.489e-7■■□□□ 13.7
GPHN-211ENST00000556020 SDHBP21912 280 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 PLA2G4AP47712 749 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 FMO5P49326 533 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 PSEN1P49768 467 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 STX17P56962 302 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 YWHAEP62258 255 aaKnown RBP18.07■□□□□ 0.48
GPHN-211ENST00000556020 SF3A2Q15428 464 aaKnown RBP18.07■□□□□ 0.48
GPHN-211ENST00000556020 CRY1Q16526 586 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 PLK5Q496M5 336 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 C10orf76Q5T2E6 689 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 TADA2BQ86TJ2 420 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 ETFBKMTQ8IXQ9 262 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 PHTF2Q8N3S3 785 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 IL17RCQ8NAC3 791 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 DUSP9Q99956 384 aaKnown RBP18.07■□□□□ 0.48
GPHN-211ENST00000556020 SMOC1Q9H4F8 434 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 DNAJC17Q9NVM6 304 aaKnown RBP18.07■□□□□ 0.48
GPHN-211ENST00000556020 TSPAN16Q9UKR8 245 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 USP3Q9Y6I4 520 aa18.07■□□□□ 0.48
GPHN-211ENST00000556020 DCDC2BA2VCK2 349 aa18.06■□□□□ 0.48
GPHN-211ENST00000556020 PPP1R3GB7ZBB8 358 aa18.06■□□□□ 0.48
GPHN-211ENST00000556020 TULP2O00295 520 aa18.06■□□□□ 0.48
GPHN-211ENST00000556020 GDF9O60383 454 aa18.06■□□□□ 0.48
GPHN-211ENST00000556020 TYRP14679 529 aa18.06■□□□□ 0.48
GPHN-211ENST00000556020 BMP6P22004 513 aa18.06■□□□□ 0.48
GPHN-211ENST00000556020 TNFRSF4P43489 277 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms