RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PPP3CAQ08209 521 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 ANO4Q32M45 955 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 EGFLAMQ63HQ2 1017 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 CEP135Q66GS9 1140 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 TOGARAM2Q6ZUX3 1019 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 CYP2U1Q7Z449 544 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 CEP57L1Q8IYX8 460 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 KIAA1958Q8N8K9 716 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 PDZD8Q8NEN9 1154 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 OVCA2Q8WZ82 227 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 DDX1Q92499 740 aaKnown RBP12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 TNIP3Q96KP6 325 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 KLF16Q9BXK1 252 aaPredicted RBP12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 EXOC1Q9NV70 894 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 TBC1D14Q9P2M4 693 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 ANGPTL2Q9UKU9 493 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 MAPK8IP1Q9UQF2 711 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 HPSEQ9Y251 543 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 SH3BP1Q9Y3L3 701 aa12.22□□□□□ -0.45
PRPF40B-212ENST00000551111 A0A1W2PQF6 199 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 TBC1D3BA6NDS4 549 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 PRRT4C9JH25 899 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 KHNYNO15037 678 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 HOXC11O43248 304 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 PDIA4P13667 645 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 GABRG2P18507 467 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 NOVA1P51513 510 aaKnown RBP12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 GAD2Q05329 585 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 SGSM1Q2NKQ1 1148 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 SH3PXD2AQ5TCZ1 1133 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 KIAA1211LQ6NV74 962 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 TPGS1Q6ZTW0 290 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 CLEC20AQ6ZU45 233 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 ZNF513Q8N8E2 541 aaPredicted RBP12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 TERB1Q8NA31 727 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 TMEM174Q8WUU8 243 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 BHMTQ93088 406 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 EEF2KMTQ96G04 330 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 SLC6A17Q9H1V8 727 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 CD248Q9HCU0 757 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 WASF3Q9UPY6 502 aa12.21□□□□□ -0.45
PRPF40B-212ENST00000551111 CKAP5Q14008 2032 aa12.21□□□□□ -0.46
PRPF40B-212ENST00000551111 ATP8B3O60423 1300 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 A0A1W2PQH9 124 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 WASH3PC4AMC7 463 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 PDXKO00764 312 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 RPN1P04843 607 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 ITPKAP23677 461 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 PIK3CAP42336 1068 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 GCLMP48507 274 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 TUBP50607 506 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 AP3M2P53677 418 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 SHC2P98077 582 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 UAP1L1Q3KQV9 507 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 EOGTQ5NDL2 527 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 C10orf76Q5T2E6 689 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 HTR3DQ70Z44 454 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 SCD5Q86SK9 330 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 PGBD3Q8N328 593 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 GOLGA5Q8TBA6 731 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 SEMA4DQ92854 862 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 OTUB2Q96DC9 234 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 CYFIP2Q96F07 1278 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 HNRNPABQ99729 332 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 MMRN2Q9H8L6 949 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 TMEM9BQ9NQ34 198 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 PLK2Q9NYY3 685 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 BCCIPQ9P287 314 aaKnown RBP eCLIP12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 DEC1Q9P2X7 70 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 RAD54BQ9Y620 910 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 TMEM131Q92545 1883 aa12.2□□□□□ -0.46
PRPF40B-212ENST00000551111 C1QTNF9BB2RNN3 333 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 NEDD8-MDP1E9PL57 170 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 MAP3K13O43283 966 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 ALDH1A2O94788 518 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 KLKB1P03952 638 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 CISD3P0C7P0 127 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 C1QTNF9P0C862 333 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 TYRP14679 529 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 CD58P19256 250 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 CMA1P23946 247 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 MAPK8P45983 427 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 VAMP7P51809 220 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 NDUFA8P51970 172 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 INCA1Q0VD86 236 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 ZNF394Q53GI3 561 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 TRIM61Q5EBN2 209 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 PPP1R26Q5T8A7 1209 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 LPCAT2Q7L5N7 544 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 UNC93AQ86WB7 457 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 HSCBQ8IWL3 235 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 DEFB124Q8NES8 71 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 OR2I1PQ8NGU4 316 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 CCDC26Q8TAB7 109 aa12.19□□□□□ -0.46
PRPF40B-212ENST00000551111 BBS2Q9BXC9 721 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms