RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CEMIPQ8WUJ3 1361 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 ABCA12Q86UK0 2595 aa5.38□□□□□ -1.55
HMGB1P23-201ENST00000518743 CNOT1A5YKK6 2376 aaKnown RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PMS2P1A4D2B8 440 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 F8W8V4 182 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 M0R3H8 397 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 GRM6O15303 877 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 TOX4O94842 621 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 KLHL18O94889 574 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 MATN4O95460 622 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 ABHD16AO95870 558 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 AMHP03971 560 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 CYP2C9P11712 490 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 MYOGP15173 224 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 ALOX15P16050 662 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 ATP5JP18859 108 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 RPL13P26373 211 aaKnown RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PDIA3P30101 505 aaKnown RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 AVPR2P30518 371 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 CARSP49589 748 aaKnown RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 GZMKP49863 264 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 HTRA4P83105 476 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 APBA1Q02410 837 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PPATQ06203 517 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PPIGQ13427 754 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 ADAM15Q13444 863 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PTK2BQ14289 1009 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 USP10Q14694 798 aaKnown RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PCOLCEQ15113 449 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 SLC10A5Q5PT55 438 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PHF19Q5T6S3 580 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 INTS11Q5TA45 600 aaKnown RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 MAP3K21Q5TCX8 1036 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 STRIP1Q5VSL9 837 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 CYP26C1Q6V0L0 522 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 Q6ZUG5 572 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 USP30Q70CQ3 517 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 OR5M3Q8NGP4 307 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZNF384Q8TF68 577 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZCCHC14Q8WYQ9 949 aaKnown RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 HEPHQ9BQS7 1158 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 CNTD2Q9H8S5 307 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 ING3Q9NXR8 418 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 FAM30AQ9NZY2 134 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 JKAMPQ9P055 326 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 LRFN1Q9P244 771 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 MBD1Q9UIS9 605 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 CLCA2Q9UQC9 943 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PCDHGB3Q9Y5G1 929 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PCDHAC2Q9Y5I4 1007 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 PMF1-BGLAPU3KQ54 211 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 RPAP1Q9BWH6 1393 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 HECTD1Q9ULT8 2610 aa5.37□□□□□ -1.55
HMGB1P23-201ENST00000518743 ANKRD17O75179 2603 aaKnown RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 A0A1B0GVC2 190 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 BTBD11A6QL63 1104 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 B5MCH6 92 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 TCP10L2B9ZVM9 353 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 PYCARD-AS1I3L0S3 204 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 PODXLO00592 558 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 NCAM2O15394 837 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 KCNQ3O43525 872 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 SLC43A1O75387 559 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 HAUS5O94927 633 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 AHSGP02765 367 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 ADRB1P08588 477 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 RAP2AP10114 183 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 MYL6BP14649 208 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZNF28P17035 718 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 PCSK1P29120 753 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 SERPINF1P36955 418 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 CDR1P51861 262 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 NPEPPSP55786 919 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 BPIFB4P59827 614 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 NOMO3P69849 1222 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 EXOSC9Q06265 439 aaKnown RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 SPARCL1Q14515 664 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 ADCK5Q3MIX3 580 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 HERC4Q5GLZ8 1057 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 C3orf38Q5JPI3 329 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 PRAMEF14Q5SWL7 426 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 HYIQ5T013 277 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 L1TD1Q5T7N2 865 aaKnown RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 KLHDC7AQ5VTJ3 777 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 AGBL4Q5VU57 503 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 TTLL5Q6EMB2 1281 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 CNKSR3Q6P9H4 555 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 PSRC1Q6PGN9 363 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 RINLQ6ZS11 566 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZNF365Q70YC5 407 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 GATAD2AQ86YP4 633 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZNF34Q8IZ26 560 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 CMTM4Q8IZR5 234 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 KLHL36Q8N4N3 616 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 SLC44A5Q8NCS7 719 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 FAM71BQ8TC56 605 aa5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 ZBED3Q96IU2 234 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P23-201ENST00000518743 TMEM39BQ9GZU3 492 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms