RNA–Protein interactions for RNA: ENST00000509620.6

OTUD4-208, Transcript of OTU deubiquitinase 4, human

TSL 1 (best) BASIC

Gene OTUD4, Length 864 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-208	ENST00000509620	ORC4	O43929	436 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	PMPCB	O75439	489 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	C1QL1	O75973	258 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	FAM163B	P0C2L3	166 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	EGR1	P18146	543 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	BMP5	P22003	454 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	FPR3	P25089	353 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	MST1	P26927	711 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	GK	P32189	559 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	MTHFS	P49914	203 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	EEFSEC	P57772	596 aa	Known RBP	4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	SLC5A9	Q2M3M2	681 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	PCID2	Q5JVF3	399 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	AKNAD1	Q5T1N1	836 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	TMTC4	Q5T4D3	741 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	FAXC	Q5TGI0	409 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	ABLIM2	Q6H8Q1	611 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	MRNIP	Q6NTE8	343 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	TLDC1	Q6P9B6	456 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	NAPRT	Q6XQN6	538 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	PARS2	Q7L3T8	475 aa	Known RBP	4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	ZNF527	Q8NB42	609 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	FAM98A	Q8NCA5	519 aa	Known RBP	4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	CCT6B	Q92526	530 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	CTHRC1	Q96CG8	243 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	LTV1	Q96GA3	475 aa	Predicted RBP	4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	UROC1	Q96N76	676 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	ZBTB26	Q9HCK0	441 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	AGO4	Q9HCK5	861 aa	Known RBP	4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	TMEM8A	Q9HCN3	771 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	IGSF9	Q9P2J2	1179 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	SLC17A6	Q9P2U8	582 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	ENTPD2	Q9Y5L3	495 aa		4.91	□□□□□ -1.62
OTUD4-208	ENST00000509620	CCDC189	A1A4V9	331 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	NPHP1	O15259	732 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	PIP5K1C	O60331	668 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	TJP3	O95049	919 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	NUDT3	O95989	172 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	FGA	P02671	866 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	RBL1	P28749	1068 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	MCM5	P33992	734 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	CHKA	P35790	457 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	CCT5	P48643	541 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	PPM1F	P49593	454 aa	Predicted RBP	4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	CYP4F2	P78329	520 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	GPS1	Q13098	491 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	GRM1	Q13255	1194 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	PUM3	Q15397	648 aa	Known RBP	4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	RAB30	Q15771	203 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	MAPKAPK3	Q16644	382 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	ERCC6L	Q2NKX8	1250 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	L1TD1	Q5T7N2	865 aa	Known RBP	4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	GGT6	Q6P531	493 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	ANKRD16	Q6P6B7	361 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	RP9	Q8TA86	221 aa	Known RBP	4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	RSPRY1	Q96DX4	576 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	THAP7	Q9BT49	309 aa	Predicted RBP	4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	ISCA1	Q9BUE6	129 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	R3HDML	Q9H3Y0	253 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	TRIM36	Q9NQ86	728 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	LUZP4	Q9P127	313 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	ASAP1	Q9ULH1	1129 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	CA14	Q9ULX7	337 aa		4.9	□□□□□ -1.63
OTUD4-208	ENST00000509620	OR2W5	A6NFC9	320 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	LRRC3C	A6NJW4	275 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	AQP12B	A6NM10	295 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	PSMD9	O00233	223 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	CES2	O00748	559 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	COQ9	O75208	318 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	CSTB	P04080	98 aa	Known RBP	4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	PRKCB	P05771	671 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	NPS	P0C0P6	89 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	DEUP1	Q05D60	604 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	MTAP	Q13126	283 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	TUBB8	Q3ZCM7	444 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	FAM153C	Q494X1	144 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	CCDC38	Q502W7	563 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	RNASE12	Q5GAN4	147 aa	Known RBP	4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	AARS2	Q5JTZ9	985 aa	Known RBP	4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	SUN3	Q8TAQ9	357 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	TRIM63	Q969Q1	353 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	MUL1	Q969V5	352 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	REPS1	Q96D71	796 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	BBC3	Q96PG8	261 aa	Predicted RBP	4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	TIMP4	Q99727	224 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	MYLK2	Q9H1R3	596 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	SEMA4G	Q9NTN9	838 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	TMOD4	Q9NZQ9	345 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	SERGEF	Q9UGK8	458 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	INSL6	Q9Y581	213 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	COL15A1	P39059	1388 aa		4.89	□□□□□ -1.63
OTUD4-208	ENST00000509620	PIP5K1B	O14986	540 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms