RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CCDC6Q16204 474 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 PMS2CLQ68D20 193 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 PHTF2Q8N3S3 785 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 ZNF276Q8N554 614 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 WHAMMQ8TF30 809 aa21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 KLF16Q9BXK1 252 aaPredicted RBP21.06■□□□□ 0.96
UBE2D3-220ENST00000505307 TULP3O75386 442 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 CAVIN2O95810 425 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 EPB41P11171 864 aaKnown RBP21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 CHRM1P11229 460 aaPredicted RBP21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 CD58P19256 250 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 PLA2G4AP47712 749 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 CREB5Q02930 508 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 KDSRQ06136 332 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 ANO4Q32M45 955 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 STPG1Q5TH74 334 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 TMEM92Q6UXU6 159 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 TMEM25Q86YD3 366 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 FBXL13Q8NEE6 735 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 MDGA1Q8NFP4 955 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 OLIG1Q8TAK6 271 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 CDK5RAP1Q96SZ6 601 aaKnown RBP21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 DUSP16Q9BY84 665 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 GTPBP4Q9BZE4 634 aaKnown RBP21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 TPSD1Q9BZJ3 242 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 MMRN2Q9H8L6 949 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.05■□□□□ 0.961e-7■■■■■ 61.1
UBE2D3-220ENST00000505307 WDR35Q9P2L0 1181 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 DNMT3LQ9UJW3 386 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 MYH10P35580 1976 aa21.05■□□□□ 0.96
UBE2D3-220ENST00000505307 SGK1O00141 431 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 IRF1P10914 325 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 PGFP49763 221 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 MXI1P50539 228 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 KIF11P52732 1056 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 MESP2Q0VG99 397 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 EMC10Q5UCC4 262 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 GPRIN1Q7Z2K8 1008 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 CCDC186Q7Z3E2 898 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 NAT16Q8N8M0 369 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 TERB1Q8NA31 727 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 SPACA7Q96KW9 195 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 XPO6Q96QU8 1125 aaKnown RBP21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 RAB20Q9NX57 234 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 MARK1Q9P0L2 795 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 STARD13Q9Y3M8 1113 aa21.04■□□□□ 0.96
UBE2D3-220ENST00000505307 MYOFQ9NZM1 2061 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 TM4SF5O14894 197 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 CYP26A1O43174 497 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 GREM1O60565 184 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 TBX18O95935 607 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 RALAP11233 206 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 RARGP13631 454 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 COBLL1Q53SF7 1204 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 GRAMD4Q6IC98 578 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 TTC30AQ86WT1 665 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 SFTPA1Q8IWL2 248 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 JAKMIP2Q96AA8 810 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 HEXIM2Q96MH2 286 aaKnown RBP21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 GSDMAQ96QA5 445 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 TSG101Q99816 390 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 UBXN6Q9BZV1 441 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 CLIC5Q9NZA1 410 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 BCCIPQ9P287 314 aaKnown RBP eCLIP21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 USP3Q9Y6I4 520 aa21.03■□□□□ 0.96
UBE2D3-220ENST00000505307 A0A1W2PQH9 124 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 GOLGA6L4A6NEF3 574 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 ANTXRLA6NF34 631 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 CACNG3O60359 315 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 HNRNPLP14866 589 aaKnown RBP eCLIP21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 KCNA4P22459 653 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 P2RY2P41231 377 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 SLC8A3P57103 927 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 SPDYCQ5MJ68 293 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 C10orf120Q5SQS8 335 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 PPP1R26Q5T8A7 1209 aaPredicted RBP21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 RNF43Q68DV7 783 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 ZNF513Q8N8E2 541 aaPredicted RBP21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 WBP2Q969T9 261 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 BBS2Q9BXC9 721 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 NMUR1Q9HB89 426 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 RXFP3Q9NSD7 469 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 OSER1Q9NX31 292 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 NAGPAQ9UK23 515 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 INVSQ9Y283 1065 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 ZNF510Q9Y2H8 683 aa21.02■□□□□ 0.96
UBE2D3-220ENST00000505307 SLC16A3O15427 465 aaKnown RBP21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 ADAM23O75077 832 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 SMC2O95347 1197 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 DPP6P42658 865 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 FKBP3Q00688 224 aaKnown RBP21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 C10orf76Q5T2E6 689 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 ZNF658Q5TYW1 1059 aaPredicted RBP21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 LPCAT2Q7L5N7 544 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 CYP2U1Q7Z449 544 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 FMR1NBQ8N0W7 255 aaPredicted RBP21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 ARHGAP18Q8N392 663 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 SEMA4DQ92854 862 aa21.01■□□□□ 0.95
UBE2D3-220ENST00000505307 TMEM176AQ96HP8 235 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms