RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 VPS16Q9H269 839 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 ELAC1Q9H777 363 aaKnown RBP6.23□□□□□ -1.41
SSR3-208ENST00000496050 RIC8AQ9NPQ8 531 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 FSCN3Q9NQT6 498 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 KCTD5Q9NXV2 234 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 PDP2Q9P2J9 529 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 ANKFY1Q9P2R3 1169 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 CCNL1Q9UK58 526 aaPredicted RBP6.23□□□□□ -1.41
SSR3-208ENST00000496050 DAPP1Q9UN19 280 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 ADGRA2Q96PE1 1338 aa6.23□□□□□ -1.41
SSR3-208ENST00000496050 RRN3P2A6NIE6 340 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 A8MVJ9 347 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 B9A039 149 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 H0Y3Z8 333 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 MPPED1O15442 326 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 NXPH3O95157 252 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 LARGE1O95461 756 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 VNN1O95497 513 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 CER1O95813 267 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 ERBB2P04626 1255 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 FESP07332 822 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 DLDP09622 509 aaKnown RBP6.22□□□□□ -1.41
SSR3-208ENST00000496050 C1SP09871 688 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 ZNF20P17024 532 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 HTR7P34969 479 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 FOLR3P41439 243 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 TBX2Q13207 712 aaPredicted RBP6.22□□□□□ -1.41
SSR3-208ENST00000496050 TMEM196Q5HYL7 178 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 PLAC9Q5JTB6 97 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 JAKMIP3Q5VZ66 844 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 KCNV1Q6PIU1 500 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 TRABD2AQ86V40 505 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 C2CD5Q86YS7 1000 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 HERC6Q8IVU3 1022 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 IL17REQ8NFR9 667 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 R3HDM4Q96D70 268 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 Q96MF0 132 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 SERHL2Q9H4I8 314 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 RXFP3Q9NSD7 469 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 GJD2Q9UKL4 321 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 CNTN6Q9UQ52 1028 aa6.22□□□□□ -1.41
SSR3-208ENST00000496050 FAM90A18PA6NE21 464 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 FAM90A16PA6NEW6 464 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 FAM90A9PA6NNJ1 464 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 FAM90A5PA8MXJ8 464 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 CBFA2T3O75081 653 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 PPP6R2O75170 966 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 PMPCBO75439 489 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 AGR2O95994 175 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 RHOP08100 348 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 IL6RP08887 468 aaPredicted RBP6.21□□□□□ -1.42
SSR3-208ENST00000496050 FAM90A15PP0C7V4 464 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 FAM90A14PP0C7W9 464 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 CREB1P16220 341 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 ZFXP17010 805 aaPredicted RBP6.21□□□□□ -1.42
SSR3-208ENST00000496050 DDIT3P35638 169 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 PBX1P40424 430 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 ACTR2P61160 394 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 MTAPQ13126 283 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 SEMA3BQ13214 749 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 TUBA3CQ13748 450 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 PTPAQ15257 358 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 CDSNQ15517 529 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 FAM110CQ1W6H9 321 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 BTBD16Q32M84 506 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 NBPF8Q3BBV2 869 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 TBC1D25Q3MII6 688 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 FBLN7Q53RD9 439 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 TUBA3EQ6PEY2 450 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 PARS2Q7L3T8 475 aaKnown RBP6.21□□□□□ -1.42
SSR3-208ENST00000496050 RRAGAQ7L523 313 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 LCORLQ8N3X6 602 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 PROKR1Q8TCW9 393 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 HMGB4Q8WW32 186 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 ASB10Q8WXI3 467 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 PAAF1Q9BRP4 392 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 WDR11Q9BZH6 1224 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 NDUFAF4Q9P032 175 aa6.21□□□□□ -1.42
SSR3-208ENST00000496050 REXO2Q9Y3B8 237 aaKnown RBP6.21□□□□□ -1.42
SSR3-208ENST00000496050 A0A1B0GVC2 190 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 E7EVH7 732 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 CHRM2P08172 466 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 CKMT1AP12532 417 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 MMP8P22894 467 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 GKP32189 559 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 SUMO2P61956 95 aaKnown RBP6.2□□□□□ -1.42
SSR3-208ENST00000496050 FOXE3Q13461 319 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 FZD5Q13467 585 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 KCNJ12Q14500 433 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 KAZNQ674X7 775 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 CCDC144NLQ6NUI1 221 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 MSANTD2Q6P1R3 559 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 PIK3AP1Q6ZUJ8 805 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 RHOUQ7L0Q8 258 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 TMEM57Q8N5G2 664 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 SIRT6Q8N6T7 355 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 CSGALNACT1Q8TDX6 532 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 CACTINQ8WUQ7 758 aaKnown RBP6.2□□□□□ -1.42
SSR3-208ENST00000496050 GOLGA1Q92805 767 aa6.2□□□□□ -1.42
SSR3-208ENST00000496050 RILPL2Q969X0 211 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms