RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 TMEM8AQ9HCN3 771 aa8.75□□□□□ -1.01
APP-216ENST00000491395 TLR8Q9NR97 1041 aaKnown RBP8.75□□□□□ -1.01
APP-216ENST00000491395 SPHK2Q9NRA0 654 aa8.75□□□□□ -1.01
APP-216ENST00000491395 VPS45Q9NRW7 570 aa8.75□□□□□ -1.01
APP-216ENST00000491395 DEC1Q9P2X7 70 aa8.75□□□□□ -1.01
APP-216ENST00000491395 SCML2Q9UQR0 700 aa8.75□□□□□ -1.01
APP-216ENST00000491395 ATP6V1DQ9Y5K8 247 aa8.75□□□□□ -1.01
APP-216ENST00000491395 CHD8Q9HCK8 2581 aa8.75□□□□□ -1.01
APP-216ENST00000491395 A0A1W2PQH9 124 aa8.74□□□□□ -1.01
APP-216ENST00000491395 TM4SF5O14894 197 aa8.74□□□□□ -1.01
APP-216ENST00000491395 HOXC11O43248 304 aaPredicted RBP8.74□□□□□ -1.01
APP-216ENST00000491395 CAVIN2O95810 425 aa8.74□□□□□ -1.01
APP-216ENST00000491395 ADRB1P08588 477 aa8.74□□□□□ -1.01
APP-216ENST00000491395 RARGP13631 454 aa8.74□□□□□ -1.01
APP-216ENST00000491395 GTF2H1P32780 548 aa8.74□□□□□ -1.01
APP-216ENST00000491395 ATP5C1P36542 298 aaKnown RBP8.74□□□□□ -1.01
APP-216ENST00000491395 KIF11P52732 1056 aa8.74□□□□□ -1.01
APP-216ENST00000491395 LIMK1P53667 647 aa8.74□□□□□ -1.01
APP-216ENST00000491395 MCCD1P59942 119 aaPredicted RBP8.74□□□□□ -1.01
APP-216ENST00000491395 ENPEPQ07075 957 aa8.74□□□□□ -1.01
APP-216ENST00000491395 PNOCQ13519 176 aa8.74□□□□□ -1.01
APP-216ENST00000491395 ZNF394Q53GI3 561 aa8.74□□□□□ -1.01
APP-216ENST00000491395 EOGTQ5NDL2 527 aa8.74□□□□□ -1.01
APP-216ENST00000491395 C10orf76Q5T2E6 689 aa8.74□□□□□ -1.01
APP-216ENST00000491395 PPP1R26Q5T8A7 1209 aaPredicted RBP8.74□□□□□ -1.01
APP-216ENST00000491395 STPG1Q5TH74 334 aa8.74□□□□□ -1.01
APP-216ENST00000491395 BTBD8Q5XKL5 378 aa8.74□□□□□ -1.01
APP-216ENST00000491395 KRT39Q6A163 491 aa8.74□□□□□ -1.01
APP-216ENST00000491395 SCD5Q86SK9 330 aa8.74□□□□□ -1.01
APP-216ENST00000491395 FRMD1Q8N878 549 aa8.74□□□□□ -1.01
APP-216ENST00000491395 CCDC150Q8NCX0 1101 aa8.74□□□□□ -1.01
APP-216ENST00000491395 OLIG1Q8TAK6 271 aa8.74□□□□□ -1.01
APP-216ENST00000491395 HMGB4Q8WW32 186 aa8.74□□□□□ -1.01
APP-216ENST00000491395 RLN3Q8WXF3 142 aa8.74□□□□□ -1.01
APP-216ENST00000491395 TATDN2Q93075 761 aa8.74□□□□□ -1.01
APP-216ENST00000491395 HEXIM2Q96MH2 286 aaKnown RBP8.74□□□□□ -1.01
APP-216ENST00000491395 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
APP-216ENST00000491395 DUSP16Q9BY84 665 aa8.74□□□□□ -1.01
APP-216ENST00000491395 CYLDQ9NQC7 956 aa8.74□□□□□ -1.01
APP-216ENST00000491395 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.74□□□□□ -1.01
APP-216ENST00000491395 NAGPAQ9UK23 515 aa8.74□□□□□ -1.01
APP-216ENST00000491395 HCN2Q9UL51 889 aa8.74□□□□□ -1.01
APP-216ENST00000491395 CIZ1Q9ULV3 898 aaPredicted RBP8.74□□□□□ -1.01
APP-216ENST00000491395 OBSL1O75147 1896 aa8.74□□□□□ -1.01
APP-216ENST00000491395 DENND4CQ5VZ89 1909 aa8.74□□□□□ -1.01
APP-216ENST00000491395 NEDD8-MDP1E9PL57 170 aa8.73□□□□□ -1.01
APP-216ENST00000491395 CETN3O15182 167 aa8.73□□□□□ -1.01
APP-216ENST00000491395 MAP3K13O43283 966 aa8.73□□□□□ -1.01
APP-216ENST00000491395 ALDH1A2O94788 518 aa8.73□□□□□ -1.01
APP-216ENST00000491395 TRIM21P19474 475 aaKnown RBP8.73□□□□□ -1.01
APP-216ENST00000491395 WASP42768 502 aa8.73□□□□□ -1.01
APP-216ENST00000491395 PRCPP42785 496 aa8.73□□□□□ -1.01
APP-216ENST00000491395 DHPSP49366 369 aaPredicted RBP8.73□□□□□ -1.01
APP-216ENST00000491395 MXI1P50539 228 aa8.73□□□□□ -1.01
APP-216ENST00000491395 EDRF1Q3B7T1 1238 aa8.73□□□□□ -1.01
APP-216ENST00000491395 HSF5Q4G112 596 aaPredicted RBP8.73□□□□□ -1.01
APP-216ENST00000491395 C10orf120Q5SQS8 335 aa8.73□□□□□ -1.01
APP-216ENST00000491395 N4BP2L1Q5TBK1 243 aaPredicted RBP8.73□□□□□ -1.01
APP-216ENST00000491395 PMS2CLQ68D20 193 aa8.73□□□□□ -1.01
APP-216ENST00000491395 RNF43Q68DV7 783 aa8.73□□□□□ -1.01
APP-216ENST00000491395 GRAMD4Q6IC98 578 aa8.73□□□□□ -1.01
APP-216ENST00000491395 TPGS1Q6ZTW0 290 aa8.73□□□□□ -1.01
APP-216ENST00000491395 ARMCX6Q7L4S7 300 aa8.73□□□□□ -1.01
APP-216ENST00000491395 C11orf74Q86VG3 221 aa8.73□□□□□ -1.01
APP-216ENST00000491395 MIB1Q86YT6 1006 aa8.73□□□□□ -1.01
APP-216ENST00000491395 FMR1NBQ8N0W7 255 aaPredicted RBP8.73□□□□□ -1.01
APP-216ENST00000491395 PGBD3Q8N328 593 aa8.73□□□□□ -1.01
APP-216ENST00000491395 ZNF513Q8N8E2 541 aaPredicted RBP8.73□□□□□ -1.01
APP-216ENST00000491395 SLC4A11Q8NBS3 891 aa8.73□□□□□ -1.01
APP-216ENST00000491395 FBXL13Q8NEE6 735 aa8.73□□□□□ -1.01
APP-216ENST00000491395 ERCC4Q92889 916 aaPredicted RBP8.73□□□□□ -1.01
APP-216ENST00000491395 ERLEC1Q96DZ1 483 aa8.73□□□□□ -1.01
APP-216ENST00000491395 P2RY11Q96G91 374 aa8.73□□□□□ -1.01
APP-216ENST00000491395 ARID3AQ99856 593 aa8.73□□□□□ -1.01
APP-216ENST00000491395 BBS2Q9BXC9 721 aa8.73□□□□□ -1.01
APP-216ENST00000491395 POLMQ9NP87 494 aaPredicted RBP8.73□□□□□ -1.01
APP-216ENST00000491395 CISHQ9NSE2 258 aa8.73□□□□□ -1.01
APP-216ENST00000491395 DNAJC17Q9NVM6 304 aaKnown RBP8.73□□□□□ -1.01
APP-216ENST00000491395 RAB20Q9NX57 234 aa8.73□□□□□ -1.01
APP-216ENST00000491395 BCCIPQ9P287 314 aaKnown RBP eCLIP8.73□□□□□ -1.01
APP-216ENST00000491395 MBD1Q9UIS9 605 aaPredicted RBP8.73□□□□□ -1.01
APP-216ENST00000491395 PCDHA5Q9Y5H7 936 aa8.73□□□□□ -1.01
APP-216ENST00000491395 ZNF638Q14966 1978 aaKnown RBP8.73□□□□□ -1.01
APP-216ENST00000491395 CEP295Q9C0D2 2601 aa8.72□□□□□ -1.01
APP-216ENST00000491395 ANAPC1Q9H1A4 1944 aa8.72□□□□□ -1.01
APP-216ENST00000491395 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.72□□□□□ -1.01
APP-216ENST00000491395 TCRBV21S2A2A0A5A6 115 aa8.72□□□□□ -1.01
APP-216ENST00000491395 C4orf47A7E2U8 309 aa8.72□□□□□ -1.01
APP-216ENST00000491395 PATE3B3GLJ2 98 aa8.72□□□□□ -1.01
APP-216ENST00000491395 KLKB1P03952 638 aa8.72□□□□□ -1.01
APP-216ENST00000491395 CISD3P0C7P0 127 aa8.72□□□□□ -1.01
APP-216ENST00000491395 EPB41P11171 864 aaKnown RBP8.72□□□□□ -1.01
APP-216ENST00000491395 TYRP14679 529 aa8.72□□□□□ -1.01
APP-216ENST00000491395 P2RY2P41231 377 aa8.72□□□□□ -1.01
APP-216ENST00000491395 PTGER3P43115 390 aa8.72□□□□□ -1.01
APP-216ENST00000491395 PLA2G4AP47712 749 aa8.72□□□□□ -1.01
APP-216ENST00000491395 PMS1P54277 932 aaKnown RBP8.72□□□□□ -1.01
APP-216ENST00000491395 RAD23BP54727 409 aa8.72□□□□□ -1.01
APP-216ENST00000491395 MAP7D1Q3KQU3 841 aa8.72□□□□□ -1.01
APP-216ENST00000491395 CBWD6Q4V339 395 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms