RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 C4BPAP04003 597 aaKnown RBP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 SLFN14P0C7P3 912 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 ZDHHC11BP0C7U3 371 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 HNRNPLP14866 589 aaKnown RBP eCLIP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 P2RY2P41231 377 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 TNFRSF4P43489 277 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 NOVA1P51513 510 aaKnown RBP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 CDH8P55286 799 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 GAD2Q05329 585 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 BYSLQ13895 437 aaKnown RBP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 PREPLQ4J6C6 727 aaPredicted RBP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 FOXD4L5Q5VV16 416 aaPredicted RBP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 DAB2IPQ5VWQ8 1189 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 BTBD8Q5XKL5 378 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 ZNF787Q6DD87 383 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 PSAPL1Q6NUJ1 521 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 PAQR9Q6ZVX9 377 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 LPCAT2Q7L5N7 544 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 TRMT11Q7Z4G4 463 aaKnown RBP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 TTC30AQ86WT1 665 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 ETFBKMTQ8IXQ9 262 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 CEP57L1Q8IYX8 460 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 FUKQ8N0W3 1084 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 KIAA0895Q8NCT3 520 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 SCAMP5Q8TAC9 235 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 FOXD4L4Q8WXT5 416 aaPredicted RBP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 TAF4BQ92750 862 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 SNX21Q969T3 373 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 NACA2Q9H009 215 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 SDCBP2Q9H190 292 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 CCSER2Q9H7U1 834 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 TMEM9BQ9NQ34 198 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 EXOC1Q9NV70 894 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 DMAC2Q9NW81 257 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 GMIPQ9P107 970 aa9.04□□□□□ -0.96
PRKCB-208ENST00000487674 BCCIPQ9P287 314 aaKnown RBP eCLIP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 EVLQ9UI08 416 aaPredicted RBP9.04□□□□□ -0.96
PRKCB-208ENST00000487674 TCRBV21S2A2A0A5A6 115 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 C4orf47A7E2U8 309 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 PATE3B3GLJ2 98 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 KLRC4O43908 158 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 TLR5O60602 858 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 ADAM23O75077 832 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 TULP3O75386 442 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 ASS1P00966 412 aaKnown RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 NR3C1P04150 777 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 RPN1P04843 607 aaKnown RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 CCDC130P13994 396 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 TRIM21P19474 475 aaKnown RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 DPP6P42658 865 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 ASPAP45381 313 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 DHPSP49366 369 aaPredicted RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 STK4Q13043 487 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 SGSM1Q2NKQ1 1148 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 FOXD4L6Q3SYB3 417 aaPredicted RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 ZACNQ401N2 412 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 SPDYCQ5MJ68 293 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 FOXD4L3Q6VB84 417 aaPredicted RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 ACOT1Q86TX2 421 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 UNC93AQ86WB7 457 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 HSCBQ8IWL3 235 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 BBS7Q8IWZ6 715 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 GRAMD1CQ8IYS0 662 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 TERB1Q8NA31 727 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 ZMIZ2Q8NF64 920 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 SLC2A14Q8TDB8 520 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 HMGB4Q8WW32 186 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 SMOQ99835 787 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 KCTD10Q9H3F6 313 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 FBXO44Q9H4M3 255 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 CSNK1G1Q9HCP0 422 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 TLR8Q9NR97 1041 aaKnown RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 SPHK2Q9NRA0 654 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 DEC1Q9P2X7 70 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 HMGXB4Q9UGU5 601 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 CHORDC1Q9UHD1 332 aaPredicted RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 CFAP45Q9UL16 551 aa9.03□□□□□ -0.96
PRKCB-208ENST00000487674 MYO18AQ92614 2054 aaKnown RBP9.03□□□□□ -0.96
PRKCB-208ENST00000487674 TBC1D3BA6NDS4 549 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 PDXKO00764 312 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 IKBKBO14920 756 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 CACNG3O60359 315 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 MYL1P05976 194 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 HSP90AA1P07900 732 aaKnown RBP9.02□□□□□ -0.97
PRKCB-208ENST00000487674 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 IRF1P10914 325 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 CSRP1P21291 193 aaKnown RBP9.02□□□□□ -0.97
PRKCB-208ENST00000487674 HOXD12P35452 270 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 GGCXP38435 758 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 PIK3CAP42336 1068 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 NDST1P52848 882 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 DLG4P78352 724 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 GOLGA8FQ08AF8 430 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 GOLGA8DPQ0D2H9 430 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 ZNF252P-AS1Q0IIN9 211 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 INCA1Q0VD86 236 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 LMAN2Q12907 356 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 ANO4Q32M45 955 aa9.02□□□□□ -0.97
PRKCB-208ENST00000487674 MAP7D1Q3KQU3 841 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms