RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 HOXC11O43248 304 aaPredicted RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 GREM1O60565 184 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 ALDH1A2O94788 518 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 SMC2O95347 1197 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 KLF8O95600 359 aaPredicted RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 CHRM1P11229 460 aaPredicted RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 RARGP13631 454 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 KIR2DL1P43626 348 aaPredicted RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 PLA2G4AP47712 749 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 PSEN1P49768 467 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 FKBP3Q00688 224 aaKnown RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 KDSRQ06136 332 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 GOLGA8FQ08AF8 430 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 GOLGA8DPQ0D2H9 430 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 SF3A2Q15428 464 aaKnown RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 ELF2Q15723 593 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 CCDC6Q16204 474 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 ANO4Q32M45 955 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 AASDHQ4L235 1098 aaPredicted RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 EOGTQ5NDL2 527 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 PLA2G2CQ5R387 149 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 ANKRD40Q6AI12 368 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 ANO7Q6IWH7 933 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 KLHDC10Q6PID8 442 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 TMEM92Q6UXU6 159 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 NUDT18Q6ZVK8 323 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 CCDC186Q7Z3E2 898 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 C11orf74Q86VG3 221 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 SFTPA1Q8IWL2 248 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 ETFBKMTQ8IXQ9 262 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 PHTF2Q8N3S3 785 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 ZNF276Q8N554 614 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 C12orf50Q8NA57 414 aaPredicted RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 IL17RCQ8NAC3 791 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 SLC4A11Q8NBS3 891 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 TXNDC5Q8NBS9 432 aaKnown RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 SPATA20Q8TB22 786 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 KCNV2Q8TDN2 545 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 TATDN2Q93075 761 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 TMEM176AQ96HP8 235 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 CNOT6LQ96LI5 555 aaKnown RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 TIGD1Q96MW7 591 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 GTPBP4Q9BZE4 634 aaKnown RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 TPSD1Q9BZJ3 242 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 UBXN6Q9BZV1 441 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 FAM124BQ9H5Z6 455 aaPredicted RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 NMUR1Q9HB89 426 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 POLMQ9NP87 494 aaPredicted RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.94□□□□□ -0.82
NUP50-215ENST00000484186 DEC1Q9P2X7 70 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 LSM7Q9UK45 103 aaKnown RBP9.94□□□□□ -0.82
NUP50-215ENST00000484186 INVSQ9Y283 1065 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 USP3Q9Y6I4 520 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 RALGAPA1Q6GYQ0 2036 aa9.94□□□□□ -0.82
NUP50-215ENST00000484186 SDK1Q7Z5N4 2213 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 SGK1O00141 431 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 SLC16A3O15427 465 aaKnown RBP9.93□□□□□ -0.82
NUP50-215ENST00000484186 TULP3O75386 442 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 RALAP11233 206 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 HNRNPLP14866 589 aaKnown RBP eCLIP9.93□□□□□ -0.82
NUP50-215ENST00000484186 GBP1P32455 592 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 MPLP40238 635 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 LIMK1P53667 647 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 RAD23BP54727 409 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 CBWD6Q4V339 395 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 CBWD3Q5JTY5 395 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 CBWD5Q5RIA9 395 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 C10orf120Q5SQS8 335 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 TCERG1LQ5VWI1 586 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 ARHGAP17Q68EM7 881 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 SCD5Q86SK9 330 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 TADA2BQ86TJ2 420 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 TTC30AQ86WT1 665 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 ZC3H3Q8IXZ2 948 aaKnown RBP9.93□□□□□ -0.82
NUP50-215ENST00000484186 MDGA1Q8NFP4 955 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 ERCC4Q92889 916 aaPredicted RBP9.93□□□□□ -0.82
NUP50-215ENST00000484186 SMARCE1Q969G3 411 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 XPO6Q96QU8 1125 aaKnown RBP9.93□□□□□ -0.82
NUP50-215ENST00000484186 SMOC1Q9H4F8 434 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 VPS45Q9NRW7 570 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 CLIC5Q9NZA1 410 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 HOOK1Q9UJC3 728 aaKnown RBP9.93□□□□□ -0.82
NUP50-215ENST00000484186 DNMT3LQ9UJW3 386 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 NAGPAQ9UK23 515 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 NUDT5Q9UKK9 219 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 COQ4Q9Y3A0 265 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 MYOFQ9NZM1 2061 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 MYH10P35580 1976 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 MYO16Q9Y6X6 1858 aa9.93□□□□□ -0.82
NUP50-215ENST00000484186 EML5Q05BV3 1969 aa9.92□□□□□ -0.82
NUP50-215ENST00000484186 KIAA1549LQ6ZVL6 1849 aa9.92□□□□□ -0.82
NUP50-215ENST00000484186 BCLAF3A2AJT9 711 aaKnown RBP9.92□□□□□ -0.82
NUP50-215ENST00000484186 NEDD8-MDP1E9PL57 170 aa9.92□□□□□ -0.82
NUP50-215ENST00000484186 MDM4O15151 490 aa9.92□□□□□ -0.82
NUP50-215ENST00000484186 TRIM24O15164 1050 aa9.92□□□□□ -0.82
NUP50-215ENST00000484186 ADAM23O75077 832 aa9.92□□□□□ -0.82
NUP50-215ENST00000484186 CAVIN2O95810 425 aa9.92□□□□□ -0.82
NUP50-215ENST00000484186 PMS1P54277 932 aaKnown RBP9.92□□□□□ -0.82
NUP50-215ENST00000484186 CREB5Q02930 508 aa9.92□□□□□ -0.82
NUP50-215ENST00000484186 LRRC63Q05C16 580 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms