RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 C12orf56Q8IXR9 622 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 ATPAF2Q8N5M1 289 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 HELQQ8TDG4 1101 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 RMDN1Q96DB5 314 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 C12orf42Q96LP6 360 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 AVENQ9NQS1 362 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-218ENST00000482171 GGA2Q9UJY4 613 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 ADGRA3Q8IWK6 1321 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 NRCAMQ92823 1304 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 O00370 1275 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 PFDN6O15212 129 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 SNX3O60493 162 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 FLT3P36888 993 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 BTKQ06187 659 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 BST2Q10589 180 aaKnown RBP11.71□□□□□ -0.54
SMPD4-218ENST00000482171 ZNF235Q14590 738 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 ANKRD20A4Q4UJ75 823 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 C10orf120Q5SQS8 335 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 MTDHQ86UE4 582 aaKnown RBP11.71□□□□□ -0.54
SMPD4-218ENST00000482171 FBXO36Q8NEA4 188 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 PDZD8Q8NEN9 1154 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 CXorf38Q8TB03 319 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 SNRNP27Q8WVK2 155 aaKnown RBP11.71□□□□□ -0.54
SMPD4-218ENST00000482171 PWWP2AQ96N64 755 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 DMAC2Q9NW81 257 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 PSMC3IPQ9P2W1 217 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-218ENST00000482171 TRIM33Q9UPN9 1127 aa11.71□□□□□ -0.54
SMPD4-218ENST00000482171 MAFBQ9Y5Q3 323 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-218ENST00000482171 GPR25O00155 361 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 RIPK2O43353 540 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 HNRNPCL1O60812 293 aaKnown RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PMPCBO75439 489 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PIAS1O75925 651 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 CBX6O95503 412 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 KRT4P19013 534 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 HOXD13P35453 343 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 CYTH1Q15438 398 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 TAF2Q6P1X5 1199 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 SLC25A41Q8N5S1 370 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PRELID2Q8N945 189 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 NSL1Q96IY1 281 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 ADAM2Q99965 735 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 NMRK2Q9NPI5 230 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 UBP1Q9NZI7 540 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PPME1Q9Y570 386 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 NHSL1Q5SYE7 1610 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 C3orf70A6NLC5 250 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 TAS2R40P59535 323 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PDK1Q15118 436 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 WSCD1Q658N2 575 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 SLFN11Q7Z7L1 901 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 NETO2Q8NC67 525 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 C18orf25Q96B23 403 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 ZNF669Q96BR6 464 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PGM2Q96G03 612 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 VCPIP1Q96JH7 1222 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PPP1R36Q96LQ0 422 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 MAGEB18Q96M61 343 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 XAB2Q9HCS7 855 aaKnown RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 CDY2AQ9Y6F7 541 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PRRC2BQ5JSZ5 2229 aaKnown RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 COL16A1Q07092 1604 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 A0A0G2JLL6 359 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 UBA6A0AVT1 1052 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 SH3BP5O60239 455 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 ACADSP16219 412 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 MCL1Q07820 350 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 RGMBQ6NW40 437 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PRRT2Q7Z6L0 340 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 DEFB106AQ8N104 65 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 PCSK9Q8NBP7 692 aaKnown RBP11.7□□□□□ -0.54
SMPD4-218ENST00000482171 SHCBP1LQ9BZQ2 653 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 WWP1Q9H0M0 922 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 TELO2Q9Y4R8 837 aa11.7□□□□□ -0.54
SMPD4-218ENST00000482171 AKAP11Q9UKA4 1901 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 MAGEA13PA6NCF6 341 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 SLC15A5A6NIM6 579 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 AMPD1P23109 780 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 STIP1P31948 543 aaKnown RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 VEPH1Q14D04 833 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 DUSP28Q4G0W2 176 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 SNX30Q5VWJ9 437 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CHSY1Q86X52 802 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CELF6Q96J87 481 aaKnown RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 GCNAQ96QF7 691 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 SERPINI1Q99574 410 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 COG5Q9UP83 839 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 KCNK1O00180 336 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 PRRG1O14668 218 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 PQBP1O60828 265 aaKnown RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 ATP6V1B1P15313 513 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 ARL2P36404 184 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 CACNA2D1P54289 1103 aa11.69□□□□□ -0.54
SMPD4-218ENST00000482171 VCPP55072 806 aaKnown RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 ZNF268Q14587 947 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-218ENST00000482171 DCP1BQ8IZD4 617 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms