RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.71□□□□□ -1.02
HDAC6-221ENST00000477561 HESX1Q9UBX0 185 aa8.71□□□□□ -1.02
HDAC6-221ENST00000477561 FBXO4Q9UKT5 387 aa8.71□□□□□ -1.02
HDAC6-221ENST00000477561 SH3BP1Q9Y3L3 701 aa8.71□□□□□ -1.02
HDAC6-221ENST00000477561 USP3Q9Y6I4 520 aa8.71□□□□□ -1.02
HDAC6-221ENST00000477561 ZFHX2Q9C0A1 2572 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-221ENST00000477561 VPS13AQ96RL7 3174 aa8.71□□□□□ -1.02
HDAC6-221ENST00000477561 F5P12259 2224 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 MYH10P35580 1976 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 CACNA1HO95180 2353 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 ANTXRLA6NF34 631 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 O00370 1275 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 SLC9A3R1O14745 358 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-221ENST00000477561 CBFA2T2O43439 604 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 RNF40O75150 1001 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 ADCY5O95622 1261 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 KRT5P13647 590 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 LCP1P13796 627 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 SLC9A1P19634 815 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 RGS7P49802 495 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 TUBP50607 506 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 CCR3P51677 355 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 TKTL1P51854 596 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 DMWDQ09019 674 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 ARHGAP44Q17R89 818 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 GAB4Q2WGN9 574 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 ZNF528Q3MIS6 628 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 C10orf120Q5SQS8 335 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 HEATR6Q6AI08 1181 aaKnown RBP8.7□□□□□ -1.02
HDAC6-221ENST00000477561 RHBDF2Q6PJF5 856 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 CCDC186Q7Z3E2 898 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 DDX42Q86XP3 938 aaKnown RBP eCLIP8.7□□□□□ -1.02
HDAC6-221ENST00000477561 MIB1Q86YT6 1006 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 BBS7Q8IWZ6 715 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 SPEM1Q8N4L4 309 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 NAT16Q8N8M0 369 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 RBBP8NLQ8NC74 664 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-221ENST00000477561 ANKRD20A12PQ8NF67 263 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 EZH1Q92800 747 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-221ENST00000477561 PPP1R9BQ96SB3 815 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 ZSWIM1Q9BR11 485 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-221ENST00000477561 ULBP1Q9BZM6 244 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 TRIM5Q9C035 493 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 FAM124BQ9H5Z6 455 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-221ENST00000477561 LRRC4Q9HBW1 653 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 CYLDQ9NQC7 956 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 PRMT8Q9NR22 394 aaPredicted RBP8.7□□□□□ -1.02
HDAC6-221ENST00000477561 KIAA1257Q9ULG3 409 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 NFE2L3Q9Y4A8 694 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 CACNA1IQ9P0X4 2223 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 PATJQ8NI35 1801 aa8.7□□□□□ -1.02
HDAC6-221ENST00000477561 E2F8A0AVK6 867 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 CHURC1-FNTBB4DL54 471 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 M0QYV0 167 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 XPO1O14980 1071 aaKnown RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 ZBED1O96006 694 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 SERPINC1P01008 464 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 TPM3P06753 285 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 HMBSP08397 361 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 PAEPP09466 180 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 RALAP11233 206 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 TDGF1P13385 188 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 CDK11BP21127 795 aaKnown RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 DRD1P21728 446 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 USP8P40818 1118 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 OPRD1P41143 372 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 PXNP49023 591 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 FNTBP49356 437 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 BCAT1P54687 386 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 SEC13P55735 322 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 YWHAGP61981 247 aaKnown RBP eCLIP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 GCNT1Q02742 428 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 ADIGQ0VDE8 80 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 MESP2Q0VG99 397 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 BST2Q10589 180 aaKnown RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 EFEMP1Q12805 493 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 PPP2R5DQ14738 602 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 ANO4Q32M45 955 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 RAB41Q5JT25 222 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 LY6G5CQ5SRR4 150 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 ZC3H14Q6PJT7 736 aaKnown RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 LCLAT1Q6UWP7 414 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 GBP6Q6ZN66 633 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 C12orf40Q86WS4 652 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 TMEM25Q86YD3 366 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 FAM114A1Q8IWE2 563 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 SFTPA1Q8IWL2 248 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 SYNPOQ8N3V7 929 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 RPLP0P6Q8NHW5 317 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 ATRIPQ8WXE1 791 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 SECISBP2LQ93073 1101 aaKnown RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 UBXN6Q9BZV1 441 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 THAP9Q9H5L6 903 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 ACP6Q9NPH0 428 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 SAMSN1Q9NSI8 373 aaKnown RBP8.69□□□□□ -1.02
HDAC6-221ENST00000477561 FANCLQ9NW38 375 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 ZSCAN32Q9NX65 697 aa8.69□□□□□ -1.02
HDAC6-221ENST00000477561 TBC1D14Q9P2M4 693 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms