RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 WDR78Q5VTH9 848 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 CCDC137Q6PK04 289 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TMEM270Q6UE05 265 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF365Q70YC5 407 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TRMT10CQ7L0Y3 403 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TAOK1Q7L7X3 1001 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PLPPR4Q7Z2D5 763 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ERMP1Q7Z2K6 904 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TMC3Q7Z5M5 1100 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ADAT2Q7Z6V5 191 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PHF13Q86YI8 300 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 BRSK2Q8IWQ3 736 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 DHX37Q8IY37 1157 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 MCOLN2Q8IZK6 566 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ABRAQ8N0Z2 381 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TTC39CQ8N584 583 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 GOLM1Q8NBJ4 401 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 RBBP8NLQ8NC74 664 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TMEM35BQ8NCS4 154 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PLEKHO2Q8TD55 490 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 BCAS4Q8TDM0 211 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ATP8B4Q8TF62 1192 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 RIN2Q8WYP3 895 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 SEC14L1Q92503 715 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 KAT5Q92993 513 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 RBM41Q96IZ5 413 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 WNK4Q96J92 1243 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 CCDC114Q96M63 670 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 Q96M66 194 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 SCLT1Q96NL6 688 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PCDHB18PQ96TA0 734 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TARS2Q9BW92 718 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 FOXP3Q9BZS1 431 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF518BQ9C0D4 1074 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 NSRP1Q9H0G5 558 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PABPC3Q9H361 631 aaKnown RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PLEKHA4Q9H4M7 779 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 MROH8Q9H579 483 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TMBIM4Q9HC24 238 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 TOPORSQ9NS56 1045 aaPredicted RBP6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 PARVAQ9NVD7 372 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ADAM22Q9P0K1 906 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 REV1Q9UBZ9 1251 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ASIC3Q9UHC3 531 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM153AQ9UHL3 310 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 STRIP2Q9ULQ0 834 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 COG5Q9UP83 839 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 AGTPBP1Q9UPW5 1226 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 ATP8A1Q9Y2Q0 1164 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 SSC5DA1L4H1 1573 aa6.21□□□□□ -1.42
ATPAF1-204ENST00000474020 A0A0G2JLL6 359 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 ZSCAN5CA6NGD5 496 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 MAGEB2O15479 319 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 RGS16O15492 202 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 HBP1O60381 514 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 USP2O75604 605 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 PROSCO94903 275 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 C4BPAP04003 597 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 EDNRBP24530 442 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 TMOD1P28289 359 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 HPDP32754 393 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 GDNFP39905 211 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 MDH1P40925 334 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 ACOT2P49753 483 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 SOX10P56693 466 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 SNX16P57768 344 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 NLRP11P59045 1033 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 PPP2R2AP63151 447 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 LACTBP83111 547 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 POU5F1Q01860 360 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 MCL1Q07820 350 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF844Q08AG5 666 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 PPIL2Q13356 520 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 BYSLQ13895 437 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 CAPSQ13938 189 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 CYP1B1Q16678 543 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 HADHQ16836 314 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF699Q32M78 642 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 TTMPQ5BVD1 217 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF484Q5JVG2 852 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 EMC10Q5UCC4 262 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 DCAF12L1Q5VU92 463 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 PRAMEF18Q5VWM3 479 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 TDRD10Q5VZ19 366 aaKnown RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 KCTD16Q68DU8 428 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 DUPD1Q68J44 220 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 DNAJC24Q6P3W2 148 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 SLC39A4Q6P5W5 647 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 DCUN1D2Q6PH85 259 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 MPZL3Q6UWV2 235 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 LRRC31Q6UY01 552 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 C15orf39Q6ZRI6 1047 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 GSTA5Q7RTV2 222 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 TMPRSS7Q7RTY8 843 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 REC114Q7Z4M0 266 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 PRRT2Q7Z6L0 340 aaPredicted RBP6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 DNAAF5Q86Y56 855 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 PALB2Q86YC2 1186 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 RCOR2Q8IZ40 523 aa6.2□□□□□ -1.42
ATPAF1-204ENST00000474020 CCDC89Q8N998 374 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms