RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 MARVELD2Q8N4S9 558 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 ZNF778Q96MU6 729 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 TRIM56Q9BRZ2 755 aaKnown RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 TELO2Q9Y4R8 837 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 PCDHAC2Q9Y5I4 1007 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 AP4B1Q9Y6B7 739 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 SIN3BO75182 1162 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 TRMUO75648 421 aaKnown RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 CD48P09326 243 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 MAPTP10636 758 aaKnown RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 NPR1P16066 1061 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 TNNI1P19237 187 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 ABCD1P33897 745 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 KRT81Q14533 505 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 HSP90AA5PQ58FG0 334 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 MROH9Q5TGP6 573 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 CC2D2BQ6DHV5 1058 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 PGM2L1Q6PCE3 622 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 NDUFAF2Q8N183 169 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 JADE3Q92613 823 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 TIMMDC1Q9NPL8 285 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 AK5Q9Y6K8 562 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 A0A0B4J269 797 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 DKC1O60832 514 aaKnown RBP eCLIP14.26□□□□□ -0.133e-6■■■■■ 48.3
NPHP4-207ENST00000470763 SNNO75324 88 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 KRT37O76014 449 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 HLA-DRAP01903 254 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 SNRPAP09012 282 aaKnown RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 NCF2P19878 526 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 ATP2B4P23634 1241 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 WNT7BP56706 349 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 TUBB3Q13509 450 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 C6orf52Q5T4I8 152 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 OGFRL1Q5TC84 451 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 VWA5B1Q5TIE3 1220 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 DNAJC24Q6P3W2 148 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 AMIGO2Q86SJ2 522 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 PHF13Q86YI8 300 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 SIKE1Q9BRV8 207 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 IFT122Q9HBG6 1241 aa14.26□□□□□ -0.13
NPHP4-207ENST00000470763 APOBEC2Q9Y235 224 aaKnown RBP14.26□□□□□ -0.13
NPHP4-207ENST00000470763 BTBD19C9JJ37 291 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 RFPL1O75677 317 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 ITGAXP20702 1163 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 MSX2P35548 267 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 ATXN3P54252 364 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 MPP3Q13368 585 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 CYP4A22Q5TCH4 519 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 B3GNT9Q6UX72 402 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 FRMD7Q6ZUT3 714 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 TMEM161BQ8NDZ6 487 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 RIN3Q8TB24 985 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 TMC2Q8TDI7 906 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 ACTRT2Q8TDY3 377 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 MFSD14AQ96MC6 490 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 MRPS26Q9BYN8 205 aaKnown RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 NMRK2Q9NPI5 230 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 CASQ2O14958 399 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 HNRNPDLO14979 420 aaKnown RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 ZNF189O75820 626 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 P4HBP07237 508 aaKnown RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 BPGMP07738 259 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 VARSP26640 1264 aaKnown RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 YWHABP31946 246 aaKnown RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 WASHC5Q12768 1159 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 SPP2Q13103 211 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 PDK1Q15118 436 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 UGCGQ16739 394 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 C16orf46Q6P387 395 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 WDR75Q8IWA0 830 aaKnown RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 RTKN2Q8IZC4 609 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 GALNT4Q8N4A0 578 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
NPHP4-207ENST00000470763 TMEM174Q8WUU8 243 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 CSRNP1Q96S65 589 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 SH3GLB1Q9Y371 365 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 TEX264Q9Y6I9 313 aa14.25□□□□□ -0.13
NPHP4-207ENST00000470763 ACO1P21399 889 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 NPTX2P47972 431 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 RPL10AP62906 217 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 DPYSL3Q14195 570 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 AOC3Q16853 763 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 FAXCQ5TGI0 409 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 KBTBD6Q86V97 674 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 PQLC1Q8N2U9 271 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 ZBTB8BQ8NAP8 495 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 APOBEC3GQ9HC16 384 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 SMYD2Q9NRG4 433 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 EXOC7Q9UPT5 735 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 TTLL3Q9Y4R7 772 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 ARHGAP10A1A4S6 786 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 DENRO43583 198 aaKnown RBP14.24□□□□□ -0.13
NPHP4-207ENST00000470763 TNFAIP8O95379 198 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 ITGB5P18084 799 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 JAG1P78504 1218 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 ZNF410Q86VK4 478 aa14.24□□□□□ -0.13
NPHP4-207ENST00000470763 PHTF2Q8N3S3 785 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms