RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 DDX53Q86TM3 631 aaKnown RBP8.57□□□□□ -1.04
RPA3-205ENST00000462723 CPNE8Q86YQ8 564 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 SCN4BQ8IWT1 228 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 ZMIZ2Q8NF64 920 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 ACTRT1Q8TDG2 376 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 CLEC4CQ8WTT0 213 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 IRGQQ8WZA9 623 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 ALG3Q92685 438 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 KRT35Q92764 455 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 FAM149B1Q96BN6 582 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 PIWIL1Q96J94 861 aaKnown RBP8.57□□□□□ -1.04
RPA3-205ENST00000462723 C8orf48Q96LL4 319 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 PGLYRP2Q96PD5 576 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 NAP1L3Q99457 506 aaPredicted RBP8.57□□□□□ -1.04
RPA3-205ENST00000462723 TRIM62Q9BVG3 475 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 VN1R3Q9BXE9 311 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 ULBP1Q9BZM6 244 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 TMEM30AQ9NV96 361 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.57□□□□□ -1.04
RPA3-205ENST00000462723 MTRRQ9UBK8 725 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 NR2E3Q9Y5X4 410 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 CDY1Q9Y6F8 540 aa8.57□□□□□ -1.04
RPA3-205ENST00000462723 CCDC85CA6NKD9 419 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 EFCAB8A8MWE9 144 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 HHLA1C9JL84 531 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 C2CD2LO14523 706 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 DAB1O75553 588 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 KRT7P08729 469 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 USP17L7P0C7H9 530 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 OR1D2P34982 312 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 PCK1P35558 622 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 GJC1P36383 396 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 FLT3P36888 993 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 CETN2P41208 172 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 MATKP42679 507 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 PTPN9P43378 593 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 MARCKSL1P49006 195 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 NDUFV1P49821 464 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 DAOAP59103 153 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 TAS2R40P59535 323 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 RPL10AP62906 217 aaKnown RBP8.56□□□□□ -1.04
RPA3-205ENST00000462723 DSG1Q02413 1049 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 ITIH3Q06033 890 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 ZFYVE27Q5T4F4 411 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 PRPF38BQ5VTL8 546 aaKnown RBP8.56□□□□□ -1.04
RPA3-205ENST00000462723 SLC8B1Q6J4K2 584 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 GPRIN1Q7Z2K8 1008 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 ZNF572Q7Z3I7 529 aaPredicted RBP8.56□□□□□ -1.04
RPA3-205ENST00000462723 POLNQ7Z5Q5 900 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 GPR65Q8IYL9 337 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 KATNAL2Q8IYT4 538 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 SCML4Q8N228 414 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 RASGEF1CQ8N431 466 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 UBXN4Q92575 508 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 CLP1Q92989 425 aaKnown RBP8.56□□□□□ -1.04
RPA3-205ENST00000462723 MS4A14Q96JA4 679 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 RNPC3Q96LT9 517 aaKnown RBP8.56□□□□□ -1.04
RPA3-205ENST00000462723 POPDC2Q9HBU9 364 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.56□□□□□ -1.04
RPA3-205ENST00000462723 MRPL17Q9NRX2 175 aaKnown RBP8.56□□□□□ -1.04
RPA3-205ENST00000462723 DDX56Q9NY93 547 aaKnown RBP8.56□□□□□ -1.04
RPA3-205ENST00000462723 TTC7AQ9ULT0 858 aaPredicted RBP8.56□□□□□ -1.04
RPA3-205ENST00000462723 STAP1Q9ULZ2 295 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 SSX2IPQ9Y2D8 614 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 SLC27A5Q9Y2P5 690 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 RWDD3Q9Y3V2 267 aa8.56□□□□□ -1.04
RPA3-205ENST00000462723 UQCRHLA0A096LP55 91 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 MTMR11A4FU01 709 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 PDE2AO00408 941 aaPredicted RBP8.55□□□□□ -1.04
RPA3-205ENST00000462723 CAPN9O14815 690 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 PRPSAP2O60256 369 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 LRCH4O75427 683 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 TADA3O75528 432 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 FGF18O76093 207 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 ZRANB2O95218 330 aaKnown RBP eCLIP8.55□□□□□ -1.04
RPA3-205ENST00000462723 FGGP02679 453 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 LTFP02788 710 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 UQCRHP07919 91 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 PYGMP11217 842 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 NOS2P35228 1153 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 GTF2F1P35269 517 aaKnown RBP eCLIP8.55□□□□□ -1.04
RPA3-205ENST00000462723 TUFMP49411 452 aaKnown RBP8.55□□□□□ -1.04
RPA3-205ENST00000462723 RABGGTBP53611 331 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 SLC5A3P53794 718 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 ATP11AP98196 1134 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 ROR1Q01973 937 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 ZNF211Q13398 564 aaPredicted RBP8.55□□□□□ -1.04
RPA3-205ENST00000462723 LONRF2Q1L5Z9 754 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 SLC25A52Q3SY17 297 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 MGAT5BQ3V5L5 792 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 CCDC14Q49A88 953 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 DCAF6Q58WW2 860 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 RASIP1Q5U651 963 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 DCAF12L1Q5VU92 463 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 DAB2IPQ5VWQ8 1189 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 TPGS2Q68CL5 300 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 PM20D1Q6GTS8 502 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 CCDC70Q6NSX1 233 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 TRNP1Q6NT89 227 aa8.55□□□□□ -1.04
RPA3-205ENST00000462723 RSPO2Q6UXX9 243 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms