RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 TRABD2BA6NFA1 517 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 KCNJ18B7U540 433 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 TACC1O75410 805 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 GCNT3O95395 438 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 ZDHHC11BP0C7U3 371 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 CD6P30203 668 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 GPD1LQ8N335 351 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 SPRYD3Q8NCJ5 442 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 RASSF8Q8NHQ8 419 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 NOC3LQ8WTT2 800 aaKnown RBP18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 FBXO32Q969P5 355 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 TOE1Q96GM8 510 aaKnown RBP18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 EPSTI1Q96J88 318 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 KCNK16Q96T55 309 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 MMS19Q96T76 1030 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 ELOVL4Q9GZR5 314 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 TM7SF3Q9NS93 570 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 WSB2Q9NYS7 404 aaPredicted RBP18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 USP36Q9P275 1121 aaKnown RBP18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 BTBD3Q9Y2F9 522 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 NFE2L3Q9Y4A8 694 aa18.24■□□□□ 0.51
UBE2D4-209ENST00000454428 ATMQ13315 3056 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 TMEM131Q92545 1883 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 EIF4E1BA6NMX2 242 aaKnown RBP18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 NEDD8-MDP1E9PL57 170 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 CILPO75339 1184 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 CST3P01034 146 aaPredicted RBP18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 CISD3P0C7P0 127 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 IRF1P10914 325 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 TUBP50607 506 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 SDE2Q6IQ49 451 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 KIAA1324Q6UXG2 1013 aaKnown RBP18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 NUDT18Q6ZVK8 323 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 PAQR9Q6ZVX9 377 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 METTL3Q86U44 580 aaKnown RBP18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 CBWD2Q8IUF1 395 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 SCUBE3Q8IX30 993 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 PDZD8Q8NEN9 1154 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 C1orf216Q8TAB5 229 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 OLFML3Q9NRN5 406 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 GMIPQ9P107 970 aa18.23■□□□□ 0.51
UBE2D4-209ENST00000454428 FAM92AA1XBS5 289 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 FRMD3A2A2Y4 597 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 ZBTB24O43167 697 aaPredicted RBP18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 RTN3O95197 1032 aaPredicted RBP18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 TNNC2P02585 160 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 NCAM1P13591 858 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 TYRP14679 529 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 GAP43P17677 238 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 DUOXA2Q1HG44 320 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 HLA-BQ31612 363 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 FUT11Q495W5 492 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 HTR3DQ70Z44 454 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 TRAPPC11Q7Z392 1133 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 OR6B3Q8NGW1 331 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 GPR174Q9BXC1 333 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 MKRN2Q9H000 416 aaKnown RBP18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 SNX25Q9H3E2 840 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 PRDM16Q9HAZ2 1276 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 MARK1Q9P0L2 795 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 PCDHB13Q9Y5F0 798 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 SLCO1B1Q9Y6L6 691 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 ZNF462Q96JM2 2506 aa18.22■□□□□ 0.51
UBE2D4-209ENST00000454428 MGAQ8IWI9 3026 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 FAM149AA5PLN7 773 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 MEI4A8MW99 385 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 GFRA2O00451 464 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 PRPF6O94906 941 aaKnown RBP18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 MATKP42679 507 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 SLC5A3P53794 718 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 DCAF12L1Q5VU92 463 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 B3GALNT2Q8NCR0 500 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 CADM4Q8NFZ8 388 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 SCFD1Q8WVM8 642 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 BBS2Q9BXC9 721 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 KLF16Q9BXK1 252 aaPredicted RBP18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 ITM2CQ9NQX7 267 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 PCDHGB2Q9Y5G2 931 aa18.21■□□□□ 0.51
UBE2D4-209ENST00000454428 MUC22E2RYF6 1773 aaPredicted RBP18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 BCAT2O15382 392 aaPredicted RBP18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 CER1O95813 267 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 TBX18O95935 607 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 FAM163BP0C2L3 166 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 TPGS1Q6ZTW0 290 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 WDR49Q8IV35 697 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 RHBDD1Q8TEB9 315 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 UBL7Q96S82 380 aaPredicted RBP18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 CDC6Q99741 560 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 MIR1-1HGQ9H1L0 117 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 FBXO10Q9UK96 956 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 R3HCC1Q9Y3T6 440 aaKnown RBP18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 STON1Q9Y6Q2 735 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 MYH10P35580 1976 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 CKAP5Q14008 2032 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 PTPRQQ9UMZ3 2332 aa18.2■□□□□ 0.5
UBE2D4-209ENST00000454428 NUMA1Q14980 2115 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 ZNF233A6NK53 670 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 GOLGA8CPA6NN73 597 aa18.19■□□□□ 0.5
UBE2D4-209ENST00000454428 METTL12A8MUP2 240 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms