RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 STN1Q9H668 368 aaKnown RBP5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 ZWILCHQ9H900 591 aa5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 MBNL3Q9NUK0 354 aaKnown RBP5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 LIN7CQ9NUP9 197 aaKnown RBP5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 HCFC1R1Q9NWW0 138 aa5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 PPP1R14DQ9NXH3 145 aa5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 MORF4L1Q9UBU8 362 aa5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 RCE1Q9Y256 329 aa5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 GDAQ9Y2T3 454 aa5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 COL15A1P39059 1388 aa5.77□□□□□ -1.49
TM9SF3-202ENST00000443638 RUSC2Q8N2Y8 1516 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 LOC105369274A0A096LPK9 316 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 LOC102723532A0A0G2JNH3 316 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 FAM90A7PA6NKC0 464 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 FAM90A22PA8MWA6 464 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 FAM90A12PA8MX19 464 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 FAM90A23PA8MXZ1 464 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 B5MCH6 92 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 ADM5C9JUS6 153 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 PEX12O00623 359 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 SEPT4O43236 478 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 SRGAP2O75044 1071 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 CYP7B1O75881 506 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 CSPG5O95196 566 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 POMCP01189 267 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 LRPAP1P30533 357 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 BSGP35613 385 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 DPP6P42658 865 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 MMP14P50281 582 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 SNX16P57768 344 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 SLFN5Q08AF3 891 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 TBL3Q12788 808 aaKnown RBP5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 MYO1EQ12965 1108 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 NFIL3Q16649 462 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 BMT2Q1RMZ1 405 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 IKBIPQ70UQ0 350 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 OR4N4Q8N0Y3 316 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 ANKRD53Q8N9V6 530 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 KCTD6Q8NC69 237 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 NUDT10Q8NFP7 164 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 SH3KBP1Q96B97 665 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 ELP4Q96EB1 424 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 NUDT11Q96G61 164 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 DESI2Q9BSY9 194 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 TTYH3Q9C0H2 523 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 RANBP17Q9H2T7 1088 aaKnown RBP5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 CXorf36Q9H7Y0 433 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 CD248Q9HCU0 757 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 PAK6Q9NQU5 681 aaPredicted RBP5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 BEX4Q9NWD9 120 aaPredicted RBP5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 VSX1Q9NZR4 365 aaPredicted RBP5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 ANGEL1Q9UNK9 670 aaKnown RBP5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 NEU2Q9Y3R4 380 aa5.76□□□□□ -1.49
TM9SF3-202ENST00000443638 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 C17orf113A0A1B0GUU1 675 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SMTNL1A8MU46 457 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 AGPSO00116 658 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 DHX16O60231 1041 aaKnown RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 VPS4BO75351 444 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 CCNDBP1O95273 360 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 BAG2O95816 211 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SCG2P13521 617 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 HGFP14210 728 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 ZNF28P17035 718 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SLC6A2P23975 617 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 IGFBP6P24592 240 aaPredicted RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 VIPR1P32241 457 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 GARSP41250 739 aaKnown RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 LILRA4P59901 499 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 ATP2C1P98194 919 aaPredicted RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 TIAL1Q01085 375 aaKnown RBP eCLIP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 KRT17Q04695 432 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 ACAP1Q15027 740 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 CSRP2Q16527 193 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 KYNUQ16719 465 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 PLEKHS1Q5SXH7 462 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 GPR139Q6DWJ6 353 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 TRMT10BQ6PF06 316 aaKnown RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 PIK3AP1Q6ZUJ8 805 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 DENND5BQ6ZUT9 1274 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 ADGRE4PQ86SQ3 457 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 VSIG10LQ86VR7 867 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 TTC30AQ86WT1 665 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 LDHDQ86WU2 507 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 REXO1L1PQ8IX06 675 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 TMEFF1Q8IYR6 380 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 ULK2Q8IYT8 1036 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 CFAP52Q8N1V2 620 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SCML4Q8N228 414 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 WDTC1Q8N5D0 677 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 FITM2Q8N6M3 262 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 ANKRD44Q8N8A2 993 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 TOR1AIP2Q8NFQ8 470 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 SUN3Q8TAQ9 357 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 DNAJB14Q8TBM8 379 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 TBC1D15Q8TC07 691 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 BORCS6Q96GS4 357 aa5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 RBM17Q96I25 401 aaKnown RBP5.75□□□□□ -1.49
TM9SF3-202ENST00000443638 HIC2Q96JB3 615 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms