RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 HERC2P3Q9BVR0 1158 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 ZBP1Q9H171 429 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 SFXN1Q9H9B4 322 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 ABCB6Q9NP58 842 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 PNPLA8Q9NP80 782 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 NCDNQ9UBB6 729 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 WNT16Q9UBV4 365 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 PTPRDP23468 1912 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 PATJQ8NI35 1801 aa12.32□□□□□ -0.44
AC009404.1-202ENST00000439955 SIGLEC16A6NMB1 481 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 TBC1D4O60343 1298 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 BUB1BO60566 1050 aaPredicted RBP12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 ERBB2P04626 1255 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 GLULP15104 373 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 PRLRP16471 622 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 GBP2P32456 591 aaPredicted RBP12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 MAN1A1P33908 653 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 USP41Q3LFD5 358 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 CFAP221Q4G0U5 840 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 CTXN3Q4LDR2 81 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 MEI1Q5TIA1 1274 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 PMF1Q6P1K2 205 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 CLEC20AQ6ZU45 233 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 ARCQ7LC44 396 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 DAAM2Q86T65 1068 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 GPR152Q8TDT2 470 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 FNIP1Q8TF40 1166 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 C2orf15Q8WU43 125 aaKnown RBP12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 PIK3R5Q8WYR1 880 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 LPIN3Q9BQK8 851 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 SELENOOQ9BVL4 669 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 FOXQ1Q9C009 403 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 ST7Q9NRC1 585 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 CHST7Q9NS84 486 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 DLGAP2Q9P1A6 1054 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 IGSF9Q9P2J2 1179 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 SIT1Q9Y3P8 196 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 BACE2Q9Y5Z0 518 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 CFAP47Q6ZTR5 3102 aa12.31□□□□□ -0.44
AC009404.1-202ENST00000439955 MYH10P35580 1976 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 TMEM191CA6NGB0 347 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 MIF4GDA9UHW6 222 aaKnown RBP12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 E5RJQ4 531 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 MYO1FO00160 1098 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 CLDN5O00501 218 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 AP1G2O75843 785 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 PROSCO94903 275 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 SOD2P04179 222 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 TCP1P17987 556 aaKnown RBP12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 SLC1A1P43005 524 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 MAGEA11P43364 429 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 AMPD2Q01433 879 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 C2CD6Q53TS8 623 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 RTP2Q5QGT7 225 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 CYP4A22Q5TCH4 519 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 VSTM1Q6UX27 236 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 PEX26Q7Z412 305 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 DDX53Q86TM3 631 aaKnown RBP12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 NT5DC3Q86UY8 548 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 PIGZQ86VD9 579 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 LRRTM3Q86VH5 581 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 SPATA2LQ8IUW3 424 aaPredicted RBP12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 MAML2Q8IZL2 1156 aaPredicted RBP12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 SCML4Q8N228 414 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 SLC44A3Q8N4M1 653 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 DMAP1Q9NPF5 467 aaPredicted RBP12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 MTRRQ9UBK8 725 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 IP6K2Q9UHH9 426 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 ANAPC7Q9UJX3 599 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 CDV3Q9UKY7 258 aaKnown RBP12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 CACNA1GO43497 2377 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 CEP250Q9BV73 2442 aa12.3□□□□□ -0.44
AC009404.1-202ENST00000439955 ACACBO00763 2458 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 TULP2O00295 520 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 CES2O00748 559 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 SART1O43290 800 aaKnown RBP12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 FBXO21O94952 628 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 FTCDO95954 541 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 ATP1A1P05023 1023 aaKnown RBP12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 CTSAP10619 480 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 KRT3P12035 628 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 KLRC2P26717 231 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 SLC6A3Q01959 620 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 DSG1Q02413 1049 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 CREMQ03060 361 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 GPR17Q13304 367 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 ACAP1Q15027 740 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 RAB41Q5JT25 222 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 SLC8B1Q6J4K2 584 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 DCUN1D2Q6PH85 259 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 OLFML1Q6UWY5 402 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 FAM183BPQ6ZVS7 135 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 SLC26A9Q7LBE3 791 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 CEP57Q86XR8 500 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 NIPA2Q8N8Q9 360 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 SPPL2BQ8TCT7 592 aa12.29□□□□□ -0.44
AC009404.1-202ENST00000439955 HES6Q96HZ4 224 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms