RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 KIAA1257Q9ULG3 409 aa18.5■□□□□ 0.55
NUP50-208ENST00000430547 PCDHB4Q9Y5E5 795 aa18.5■□□□□ 0.55
NUP50-208ENST00000430547 USP3Q9Y6I4 520 aa18.5■□□□□ 0.55
NUP50-208ENST00000430547 SPAG17Q6Q759 2223 aa18.5■□□□□ 0.55
NUP50-208ENST00000430547 EML5Q05BV3 1969 aa18.5■□□□□ 0.55
NUP50-208ENST00000430547 APODP05090 189 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 VDRP11473 427 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 TKTL1P51854 596 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 SEC13P55735 322 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 MARSP56192 900 aaKnown RBP18.49■□□□□ 0.55
NUP50-208ENST00000430547 BST2Q10589 180 aaKnown RBP18.49■□□□□ 0.55
NUP50-208ENST00000430547 LPAL2Q16609 132 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 ANO4Q32M45 955 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 PREPLQ4J6C6 727 aaPredicted RBP18.49■□□□□ 0.55
NUP50-208ENST00000430547 CEP68Q76N32 757 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 RSRC2Q7L4I2 434 aaKnown RBP18.49■□□□□ 0.55
NUP50-208ENST00000430547 WDR5BQ86VZ2 330 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 TTC30AQ86WT1 665 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 DCLK2Q8N568 766 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 CAMKK1Q8N5S9 505 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 LRRC4Q9HBW1 653 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 CLIC5Q9NZA1 410 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 RWDD2AQ9UIY3 292 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 NUDT5Q9UKK9 219 aa18.49■□□□□ 0.55
NUP50-208ENST00000430547 XPO1O14980 1071 aaKnown RBP18.48■□□□□ 0.55
NUP50-208ENST00000430547 PAEPP09466 180 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 PLA2G4AP47712 749 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 KDSRQ06136 332 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 PDE4CQ08493 712 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 DMC1Q14565 340 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 TPD52L1Q16890 204 aaPredicted RBP18.48■□□□□ 0.55
NUP50-208ENST00000430547 GAB4Q2WGN9 574 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 C2orf27AQ580R0 203 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 LAIR1Q6GTX8 287 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 NUDT18Q6ZVK8 323 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 HTR3DQ70Z44 454 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 SYT13Q7L8C5 426 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.48■□□□□ 0.55
NUP50-208ENST00000430547 MIB1Q86YT6 1006 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 EZH1Q92800 747 aaPredicted RBP18.48■□□□□ 0.55
NUP50-208ENST00000430547 IPO9Q96P70 1041 aaKnown RBP18.48■□□□□ 0.55
NUP50-208ENST00000430547 HHIPQ96QV1 700 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 ARHGEF4Q9NR80 690 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 SPHK2Q9NRA0 654 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 RASAL2Q9UJF2 1139 aa18.48■□□□□ 0.55
NUP50-208ENST00000430547 CCDC163A0A0D9SF12 145 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 MDM4O15151 490 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 KAT7O95251 611 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 ZBED1O96006 694 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 SETSIPP0DME0 302 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 SLC6A11P48066 632 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 PXNP49023 591 aaPredicted RBP18.47■□□□□ 0.55
NUP50-208ENST00000430547 EFEMP1Q12805 493 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 SRSF5Q13243 272 aaKnown RBP18.47■□□□□ 0.55
NUP50-208ENST00000430547 RAB41Q5JT25 222 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 RRAGAQ7L523 313 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 SCD5Q86SK9 330 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 SIX6OS1Q8N1H7 587 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 ZNF276Q8N554 614 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 GPR161Q8N6U8 529 aaKnown RBP18.47■□□□□ 0.55
NUP50-208ENST00000430547 UBR7Q8N806 425 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 MLKLQ8NB16 471 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 EHBP1Q8NDI1 1231 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 WBP2Q969T9 261 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 STRIP2Q9ULQ0 834 aa18.47■□□□□ 0.55
NUP50-208ENST00000430547 K7EQS6 105 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 O00370 1275 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 HOXC11O43248 304 aaPredicted RBP18.46■□□□□ 0.55
NUP50-208ENST00000430547 HRO43593 1189 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 APBB3O95704 486 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 GRIA2P42262 883 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 YWHAGP61981 247 aaKnown RBP eCLIP18.46■□□□□ 0.55
NUP50-208ENST00000430547 MRPS21P82921 87 aaKnown RBP18.46■□□□□ 0.55
NUP50-208ENST00000430547 COG7P83436 770 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 GCNT1Q02742 428 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 ADIGQ0VDE8 80 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 STILQ15468 1287 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 C12orf40Q86WS4 652 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 NAT16Q8N8M0 369 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 RBBP8NLQ8NC74 664 aaPredicted RBP18.46■□□□□ 0.55
NUP50-208ENST00000430547 LMO3Q8TAP4 145 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 UBA3Q8TBC4 463 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 USP33Q8TEY7 942 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 CNOT6LQ96LI5 555 aaKnown RBP18.46■□□□□ 0.55
NUP50-208ENST00000430547 ULBP1Q9BZM6 244 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 CLSTN2Q9H4D0 955 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 DEC1Q9P2X7 70 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 SPTBN4Q9H254 2564 aa18.46■□□□□ 0.55
NUP50-208ENST00000430547 MYO18AQ92614 2054 aaKnown RBP18.45■□□□□ 0.54
NUP50-208ENST00000430547 NEDD8-MDP1E9PL57 170 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 M0QYV0 167 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 TULP2O00295 520 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 RPP40O75818 363 aaKnown RBP18.45■□□□□ 0.54
NUP50-208ENST00000430547 HOXC13P31276 330 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 TMEM25Q86YD3 366 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 ARHGEF19Q8IW93 802 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 TSTD1Q8NFU3 115 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 GAB3Q8WWW8 586 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 KAT5Q92993 513 aa18.45■□□□□ 0.54
NUP50-208ENST00000430547 XPO6Q96QU8 1125 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms