RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 FOXK2Q01167 660 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 MESP2Q0VG99 397 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 CUL2Q13617 745 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 USP39Q53GS9 565 aaKnown RBP9.78□□□□□ -0.84
NUP50-206ENST00000422489 ANO7Q6IWH7 933 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 NUDT18Q6ZVK8 323 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 HTR3DQ70Z44 454 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 ERMP1Q7Z2K6 904 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 SCD5Q86SK9 330 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 TADA2BQ86TJ2 420 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 CREBRFQ8IUR6 639 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 ALLCQ8N6M5 410 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 TXNDC5Q8NBS9 432 aaKnown RBP9.78□□□□□ -0.84
NUP50-206ENST00000422489 SPATA20Q8TB22 786 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 UBA3Q8TBC4 463 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 NELFBQ8WX92 580 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 OTUB2Q96DC9 234 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 FAXDC2Q96IV6 333 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
NUP50-206ENST00000422489 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.78□□□□□ -0.84
NUP50-206ENST00000422489 HESX1Q9UBX0 185 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 RASAL2Q9UJF2 1139 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 DNMT3LQ9UJW3 386 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 CDV3Q9UKY7 258 aaKnown RBP9.78□□□□□ -0.84
NUP50-206ENST00000422489 MIA3Q5JRA6 1907 aa9.78□□□□□ -0.84
NUP50-206ENST00000422489 DCDC2BA2VCK2 349 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 PPP1R3GB7ZBB8 358 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 NEDD8-MDP1E9PL57 170 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 TRIM24O15164 1050 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 TULP3O75386 442 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 ALDH1A2O94788 518 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 RHOBTB1O94844 696 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 PPP1R2P41236 205 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 WASP42768 502 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 FMO5P49326 533 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 PSEN1P49768 467 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 TKTL1P51854 596 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 ATXN1P54253 815 aaKnown RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 YWHAEP62258 255 aaKnown RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 CETN1Q12798 172 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 EFEMP1Q12805 493 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 CSRP2Q16527 193 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 GOLGA7BQ2TAP0 167 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 PREPLQ4J6C6 727 aaPredicted RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 SGO2Q562F6 1265 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 ARHGAP17Q68EM7 881 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 GRAMD4Q6IC98 578 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 RSRC2Q7L4I2 434 aaKnown RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 CCDC186Q7Z3E2 898 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 PIGZQ86VD9 579 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 ZC3H3Q8IXZ2 948 aaKnown RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 ELOA2Q8IYF1 753 aaPredicted RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 ANKRD52Q8NB46 1076 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 NDRG1Q92597 394 aaKnown RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 BHMTQ93088 406 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 SLC35C1Q96A29 364 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 CEP63Q96MT8 703 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 XPO6Q96QU8 1125 aaKnown RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 DUSP9Q99956 384 aaKnown RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 BBS2Q9BXC9 721 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 UBXN6Q9BZV1 441 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 LRRC4Q9HBW1 653 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 PNPLA8Q9NP80 782 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 POLMQ9NP87 494 aaPredicted RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 CYLDQ9NQC7 956 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 DNAJC17Q9NVM6 304 aaKnown RBP9.77□□□□□ -0.85
NUP50-206ENST00000422489 DLL3Q9NYJ7 618 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 BCCIPQ9P287 314 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUP50-206ENST00000422489 WDR35Q9P2L0 1181 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 MMP17Q9ULZ9 603 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 CTNND2Q9UQB3 1225 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 COQ4Q9Y3A0 265 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 PCDHB4Q9Y5E5 795 aa9.77□□□□□ -0.85
NUP50-206ENST00000422489 CACNA1IQ9P0X4 2223 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 A0A0A0MRY4 1105 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 SLC12A8A0AV02 714 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 BICDL2A1A5D9 508 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 SGK1O00141 431 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 HOXC11O43248 304 aaPredicted RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 MAP3K13O43283 966 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 GDF9O60383 454 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 LRP3O75074 770 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 VDRP11473 427 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 BMP6P22004 513 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 EIF2DP41214 584 aaKnown RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 YWHAGP61981 247 aaKnown RBP eCLIP9.76□□□□□ -0.85
NUP50-206ENST00000422489 CREB5Q02930 508 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 PDE4CQ08493 712 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 MORC3Q14149 939 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 SF3A2Q15428 464 aaKnown RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 ELF2Q15723 593 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 CRY1Q16526 586 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 CAMK4Q16566 473 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 PLK5Q496M5 336 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 AASDHQ4L235 1098 aaPredicted RBP9.76□□□□□ -0.85
NUP50-206ENST00000422489 EOGTQ5NDL2 527 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 C10orf76Q5T2E6 689 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 SDE2Q6IQ49 451 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 TMEM92Q6UXU6 159 aa9.76□□□□□ -0.85
NUP50-206ENST00000422489 PRR23CQ6ZRP0 262 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms