RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 C9orf57Q5W0N0 161 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 ASRGL1Q7L266 308 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 CDKL3Q8IVW4 592 aaPredicted RBP17.51■□□□□ 0.39
NUP50-203ENST00000407019 MS4A4AQ96JQ5 239 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 KLF6Q99612 283 aaPredicted RBP17.51■□□□□ 0.39
NUP50-203ENST00000407019 B3GNT5Q9BYG0 378 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 MYLK2Q9H1R3 596 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 ABHD16BQ9H3Z7 469 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 DPEP3Q9H4B8 488 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 NOD2Q9HC29 1040 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 PNPLA8Q9NP80 782 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 ARHGEF3Q9NR81 526 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 ETNK2Q9NVF9 386 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 CNTN3Q9P232 1028 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 HES2Q9Y543 173 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 DCTN3O75935 186 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 CYP2F1P24903 491 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 ALDH3A1P30838 453 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 SLC8A1P32418 973 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 BST2Q10589 180 aaKnown RBP17.5■□□□□ 0.39
NUP50-203ENST00000407019 SOWAHAQ2M3V2 549 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 IQSEC1Q6DN90 963 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 CFAP36Q96G28 342 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 OSMRQ99650 979 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 TRIM6Q9C030 488 aaPredicted RBP17.5■□□□□ 0.39
NUP50-203ENST00000407019 NXF3Q9H4D5 531 aaKnown RBP17.5■□□□□ 0.39
NUP50-203ENST00000407019 NRDE2Q9H7Z3 1164 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 SPON1Q9HCB6 807 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 TXLNGQ9NUQ3 528 aa17.5■□□□□ 0.39
NUP50-203ENST00000407019 UBQLN1Q9UMX0 589 aaKnown RBP17.5■□□□□ 0.39
NUP50-203ENST00000407019 SCN1AP35498 2009 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 AVILO75366 819 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 RECQL4O94761 1208 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 UNC5CO95185 931 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 MAP3K6O95382 1288 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 FGFR1P11362 822 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 MAGEA6P43360 314 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 GTF2A2P52657 109 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 BCAT1P54687 386 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 FAXCQ5TGI0 409 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 FYB2Q5VWT5 728 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 C4orf22Q6V702 233 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 SLC26A9Q7LBE3 791 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 OTOAQ7RTW8 1153 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 AGGF1Q8N302 714 aaeCLIP17.49■□□□□ 0.39
NUP50-203ENST00000407019 KIF2BQ8N4N8 673 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 C7orf31Q8N865 590 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 C10orf82Q8WW14 230 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 ERP27Q96DN0 273 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 LPIN3Q9BQK8 851 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 TINF2Q9BSI4 451 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 VPS11Q9H270 941 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 CDHR5Q9HBB8 845 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 SLC17A7Q9P2U7 560 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 CHKBQ9Y259 395 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 A6NJR5 290 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 LPXNO60711 386 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 CCDC130P13994 396 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 TFE3P19532 575 aaPredicted RBP17.49■□□□□ 0.39
NUP50-203ENST00000407019 ADORA2BP29275 332 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 SCNN1AP37088 669 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 FAAP100Q0VG06 881 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 PCBP1Q15365 356 aaKnown RBP eCLIP17.49■□□□□ 0.39
NUP50-203ENST00000407019 DPYSL2Q16555 572 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 ALKAL1Q6UXT8 129 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 ANKRD52Q8NB46 1076 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 CLEC4CQ8WTT0 213 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 APOPT1Q96IL0 206 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 LRRC37BQ96QE4 947 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 APOL6Q9BWW8 343 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 ZNF408Q9H9D4 720 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 CYLDQ9NQC7 956 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 TTLL3Q9Y4R7 772 aa17.49■□□□□ 0.39
NUP50-203ENST00000407019 WDR91A4D1P6 747 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 HCRTO43612 131 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 ATP5HO75947 161 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 KRT16P08779 473 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 SMIM10L2AP0DMW4 78 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 SMIM10L2BP0DMW5 78 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 DARSP14868 501 aaKnown RBP17.48■□□□□ 0.39
NUP50-203ENST00000407019 ZFXP17010 805 aaPredicted RBP17.48■□□□□ 0.39
NUP50-203ENST00000407019 L1CAMP32004 1257 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 FBXO47Q5MNV8 452 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 FAM182AQ5T1J6 154 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 ARCQ7LC44 396 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 ANKRD23Q86SG2 305 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 CCDC110Q8TBZ0 833 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 BRI3BPQ8WY22 251 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 SERAC1Q96JX3 654 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 C11orf84Q9BUA3 381 aaPredicted RBP17.48■□□□□ 0.39
NUP50-203ENST00000407019 DHX35Q9H5Z1 703 aaKnown RBP17.48■□□□□ 0.39
NUP50-203ENST00000407019 ETNK1Q9HBU6 452 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 POPDC2Q9HBU9 364 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 TRIM33Q9UPN9 1127 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 NRCAMQ92823 1304 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 ADCY6O43306 1168 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 CD4P01730 458 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 APRTP07741 180 aa17.48■□□□□ 0.39
NUP50-203ENST00000407019 TROVE2P10155 538 aaKnown RBP eCLIP17.48■□□□□ 0.39
NUP50-203ENST00000407019 LCP1P13796 627 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms