RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ADRA1DP25100 572 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 GCNT1Q02742 428 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 CYP24A1Q07973 514 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 NAB1Q13506 487 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 TBCELQ5QJ74 424 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 FOXR2Q6PJQ5 311 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 NUDT18Q6ZVK8 323 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 LRRC8DQ7L1W4 858 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 LUZP2Q86TE4 346 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 ATG4CQ96DT6 458 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 SGF29Q96ES7 293 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 ZNF333Q96JL9 665 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 TMEM39BQ9GZU3 492 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 KIAA1683Q9H0B3 1180 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.73■□□□□ 0.432e-7■■■□□ 17.1
SIN3A-203ENST00000394949 AAR2Q9Y312 384 aaKnown RBP17.73■□□□□ 0.43
SIN3A-203ENST00000394949 TRDMT1O14717 391 aaKnown RBP17.73■□□□□ 0.43
SIN3A-203ENST00000394949 GRIK1P39086 918 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 PBX1P40424 430 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 MLH1P40692 756 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 PDK4Q16654 411 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.73■□□□□ 0.43
SIN3A-203ENST00000394949 GPRC5AQ8NFJ5 357 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 HPDLQ96IR7 371 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 USP18Q9UMW8 372 aa17.73■□□□□ 0.43
SIN3A-203ENST00000394949 UBDO15205 165 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 OCM2P0CE71 109 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 OCMP0CE72 109 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 PTPN7P35236 360 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 MMP13P45452 471 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 DCAF6Q58WW2 860 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 KCNT1Q5JUK3 1230 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 N4BP2L1Q5TBK1 243 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 FAM9CQ8IZT9 166 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 STMN3Q9NZ72 180 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 DAPK2Q9UIK4 370 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 CAB39Q9Y376 341 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 SLC30A1Q9Y6M5 507 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 V9GYQ6 96 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 OGTO15294 1046 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 TSHRP16473 764 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 LAMC2Q13753 1193 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 DUPD1Q68J44 220 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 STRA8Q7Z7C7 330 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 ERO1BQ86YB8 467 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 CLVS1Q8IUQ0 354 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 WDR60Q8WVS4 1066 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 MTIF3Q9H2K0 278 aaKnown RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 AFF4Q9UHB7 1163 aaKnown RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 OPLAHO14841 1288 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 CYBBP04839 570 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 CYP2C9P11712 490 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 MYL4P12829 197 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 POU4F1Q01851 419 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 ILF2Q12905 390 aaKnown RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 MPP3Q13368 585 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 BMPR2Q13873 1038 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 NFYCQ13952 458 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 TMEM139Q8IV31 216 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 INPP4AQ96PE3 977 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 THUMPD3Q9BV44 507 aaKnown RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 IMPAD1Q9NX62 359 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 PRR23D1E9PI22 279 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 LZTS3O60299 673 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 TRIM13O60858 407 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 TADA2AO75478 443 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 PRR23D2P0DMB1 279 aaPredicted RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 CETPP11597 493 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 RPL5P46777 297 aaKnown RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 ZCCHC7Q8N3Z6 543 aaKnown RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 LRRC39Q96DD0 335 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 AGBL1Q96MI9 1066 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 SH3GL1Q99961 368 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 BLOC1S4Q9NUP1 217 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 FAM49BQ9NUQ9 324 aa17.72■□□□□ 0.43
SIN3A-203ENST00000394949 EIF3LQ9Y262 564 aaKnown RBP17.72■□□□□ 0.43
SIN3A-203ENST00000394949 NCANO14594 1321 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 SHBGP04278 402 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 GP5P40197 560 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 MIIPQ5JXC2 388 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 GLB1LQ6UWU2 654 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 CCDC33Q8N5R6 958 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 SAMD3Q8N6K7 520 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 ZFYVE28Q9HCC9 887 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 MAGEB16A2A368 324 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 TBC1D12O60347 775 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 TPP2P29144 1249 aaPredicted RBP17.71■□□□□ 0.43
SIN3A-203ENST00000394949 SV2AQ7L0J3 742 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 SLC7A14Q8TBB6 771 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 RSPH1Q8WYR4 309 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 ARMCX1Q9P291 453 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 CLOCKO15516 846 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 ARMCX4Q5H9R4 360 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 SLC22A9Q8IVM8 553 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 KATNAL2Q8IYT4 538 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 BDH2Q9BUT1 245 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 LSM7Q9UK45 103 aaKnown RBP17.71■□□□□ 0.43
SIN3A-203ENST00000394949 CROTQ9UKG9 612 aa17.71■□□□□ 0.43
SIN3A-203ENST00000394949 PKP3Q9Y446 797 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms