RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 DPYSL2Q16555 572 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 C1orf228Q6PIY5 440 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 ATG14Q6ZNE5 492 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 RNF169Q8NCN4 708 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 PRR11Q96HE9 360 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-202ENST00000394888 OXNAD1Q96HP4 312 aaPredicted RBP16.03■□□□□ 0.16
CPSF7-202ENST00000394888 MPHOSPH6Q99547 160 aaKnown RBP16.03■□□□□ 0.16
CPSF7-202ENST00000394888 NYNRINQ9P2P1 1898 aaKnown RBP16.03■□□□□ 0.16
CPSF7-202ENST00000394888 CCDC130P13994 396 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 VAV1P15498 845 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 ATP11AP98196 1134 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 PLCB3Q01970 1234 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 GBE1Q04446 702 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 KIF2BQ8N4N8 673 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 ATP11CQ8NB49 1132 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 TCP10LQ8TDR4 215 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 THOC1Q96FV9 657 aaKnown RBP16.03■□□□□ 0.16
CPSF7-202ENST00000394888 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 ANLNQ9NQW6 1124 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 TMPRSS4Q9NRS4 437 aa16.03■□□□□ 0.16
CPSF7-202ENST00000394888 MYO18AQ92614 2054 aaKnown RBP16.02■□□□□ 0.16
CPSF7-202ENST00000394888 IGF2BP3O00425 579 aaKnown RBP eCLIP16.02■□□□□ 0.16
CPSF7-202ENST00000394888 F2P00734 622 aa16.02■□□□□ 0.16
CPSF7-202ENST00000394888 GRIA1P42261 906 aa16.02■□□□□ 0.16
CPSF7-202ENST00000394888 ROR1Q01973 937 aa16.02■□□□□ 0.16
CPSF7-202ENST00000394888 GLRA4Q5JXX5 417 aa16.02■□□□□ 0.16
CPSF7-202ENST00000394888 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
CPSF7-202ENST00000394888 ARCQ7LC44 396 aa16.02■□□□□ 0.16
CPSF7-202ENST00000394888 MRRFQ96E11 262 aaKnown RBP16.02■□□□□ 0.16
CPSF7-202ENST00000394888 KCTD15Q96SI1 283 aaPredicted RBP16.02■□□□□ 0.16
CPSF7-202ENST00000394888 KIAA1257Q9ULG3 409 aa16.02■□□□□ 0.16
CPSF7-202ENST00000394888 SCN10AQ9Y5Y9 1956 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 SUN1O94901 812 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 GM2AP17900 193 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 PRKCHP24723 683 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 RNASELQ05823 741 aaKnown RBP16.02■□□□□ 0.15
CPSF7-202ENST00000394888 NCBP2-AS2Q69YL0 99 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 CEP128Q6ZU80 1094 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 RFWD2Q8NHY2 731 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 STK32AQ8WU08 396 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 PYROXD1Q8WU10 500 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 NT5C3BQ969T7 300 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 KLF6Q99612 283 aaPredicted RBP16.02■□□□□ 0.15
CPSF7-202ENST00000394888 NSRP1Q9H0G5 558 aaKnown RBP16.02■□□□□ 0.15
CPSF7-202ENST00000394888 PPCSQ9HAB8 311 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 TMEM30AQ9NV96 361 aa16.02■□□□□ 0.15
CPSF7-202ENST00000394888 SLC15A5A6NIM6 579 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 BEST1O76090 585 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 CETN2P41208 172 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 WDR78Q5VTH9 848 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 OR6B2Q6IFH4 312 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 OSTM1Q86WC4 334 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 PYROXD2Q8N2H3 581 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 SIGLEC10Q96LC7 697 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 SENP1Q9P0U3 644 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 SHROOM3Q8TF72 1996 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 A6NJR5 290 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 HAS3O00219 553 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 DGKIO75912 1065 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 UNC5CO95185 931 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 PTPN9P43378 593 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 KYAT1Q16773 422 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 PREPLQ4J6C6 727 aaPredicted RBP16.01■□□□□ 0.15
CPSF7-202ENST00000394888 ZFYVE27Q5T4F4 411 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 FAXCQ5TGI0 409 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 TLDC1Q6P9B6 456 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 CRYBG2Q8N1P7 616 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 PITPNM3Q9BZ71 974 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 GOLGA2P5Q9HBQ8 144 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 RFPL1O75677 317 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 FAAP100Q0VG06 881 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 TBC1D1Q86TI0 1168 aaPredicted RBP16.01■□□□□ 0.15
CPSF7-202ENST00000394888 LRRC52Q8N7C0 313 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 SMG8Q8ND04 991 aaKnown RBP16.01■□□□□ 0.15
CPSF7-202ENST00000394888 DYDC1Q8WWB3 177 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 NDRG1Q92597 394 aaKnown RBP16.01■□□□□ 0.15
CPSF7-202ENST00000394888 ZNF670Q9BS34 389 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 NOD2Q9HC29 1040 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 SNX9Q9Y5X1 595 aa16.01■□□□□ 0.15
CPSF7-202ENST00000394888 TGM2P21980 687 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 STIP1P31948 543 aaKnown RBP16■□□□□ 0.15
CPSF7-202ENST00000394888 SKIV2L2P42285 1042 aaKnown RBP16■□□□□ 0.15
CPSF7-202ENST00000394888 SLC27A1Q6PCB7 646 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 SLC26A9Q7LBE3 791 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 CCDC77Q9BR77 488 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 GOLGA8RI6L899 631 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 PRKCGP05129 697 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 SMIM10L2AP0DMW4 78 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 SMIM10L2BP0DMW5 78 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 AKAP5P24588 427 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 ZNF200P98182 395 aaPredicted RBP16■□□□□ 0.15
CPSF7-202ENST00000394888 IL9RQ01113 521 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 PDK2Q15119 407 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 DCAF4L1Q3SXM0 396 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 DPH6Q7L8W6 267 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 ETNK1Q9HBU6 452 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 GDAP2Q9NXN4 497 aa16■□□□□ 0.15
CPSF7-202ENST00000394888 MCF2LO15068 1137 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms