RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 RORBQ92753 470 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 IL1RL2Q9HB29 575 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 EPB41L4AQ9HCS5 686 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 WWOXQ9NZC7 414 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 USP18Q9UMW8 372 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 PCDHA3Q9Y5H8 950 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 DPYSL4O14531 572 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 DNALI1O14645 258 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 SUPT7LO94864 414 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ABHD2P08910 425 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 CPB1P15086 417 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 TFE3P19532 575 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 GNL1P36915 607 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 ELF3P78545 371 aaPredicted RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 OTUD4Q01804 1114 aaKnown RBP9.87□□□□□ -0.83
SNX1-202ENST00000380285 ACCSLQ4AC99 568 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 CHST13Q8NET6 341 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 VTA1Q9NP79 307 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ARHGAP20Q9P2F6 1191 aa9.87□□□□□ -0.83
SNX1-202ENST00000380285 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 PIK3R1P27986 724 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 SFSWAPQ12872 951 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 EIF2B5Q13144 721 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 ZCCHC9Q8N567 271 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 CAMKK2Q96RR4 588 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 LACRTQ9GZZ8 138 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 CLEC4MQ9H2X3 399 aaPredicted RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 ERAP1Q9NZ08 941 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 SRP68Q9UHB9 627 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 SF3B1O75533 1304 aaKnown RBP eCLIP9.86□□□□□ -0.834e-7■■■■■ 86.2
SNX1-202ENST00000380285 TMEM114B3SHH9 223 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 F8W810 466 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 MMP14P50281 582 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 UBE3AQ05086 875 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 LMBRD2Q68DH5 695 aaPredicted RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 MIEF2Q96C03 454 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 TRPC7Q9HCX4 862 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 TBC1D13Q9NVG8 400 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 TUBA8Q9NY65 449 aaPredicted RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 DNAJC5BQ9UF47 199 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 DAPK2Q9UIK4 370 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 MKL2Q9ULH7 1088 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 CORO1CQ9ULV4 474 aaPredicted RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 ZMYM2Q9UBW7 1377 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 HACD1B0YJ81 288 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 PHGDHO43175 533 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 CBFA2T3O75081 653 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 ETFBP38117 255 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 RGS7P49802 495 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 BLVRAP53004 296 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 MPP3Q13368 585 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 TSNQ15631 228 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 TBCELQ5QJ74 424 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 STRA8Q7Z7C7 330 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 DHFR2Q86XF0 187 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 ZNF34Q8IZ26 560 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 MAGEC3Q8TD91 643 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 PPP1R10Q96QC0 940 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 SFMBT1Q9UHJ3 866 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 MAPRE3Q9UPY8 281 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 PIN4Q9Y237 131 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 LDLRP01130 860 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 ANXA6P08133 673 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 BCAT1P54687 386 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 DDR1Q08345 913 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 SCARA3Q6AZY7 606 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 ZKSCAN4Q969J2 545 aaPredicted RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 GPR63Q9BZJ6 419 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 PCDHGC5Q9Y5F6 944 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 FCHO1O14526 889 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 OGTO15294 1046 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 DDHD2O94830 711 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 CRTAMO95727 393 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 SLC25A27O95847 323 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 SREBF1P36956 1147 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 EIF2B2P49770 351 aaKnown RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 CCT8P50990 548 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 ATXN3P54252 364 aaPredicted RBP9.86□□□□□ -0.83
SNX1-202ENST00000380285 TRIQKQ629K1 86 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 CGRRF1Q99675 332 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 DCLK3Q9C098 648 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 RGS18Q9NS28 235 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 CROTQ9UKG9 612 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 TRIM13O60858 407 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 ERFP50548 548 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 FAM45AQ8TCE6 357 aa9.86□□□□□ -0.83
SNX1-202ENST00000380285 GH1P01241 217 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 SPP2Q13103 211 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 KLHL12Q53G59 568 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 LAYNQ6UX15 382 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 ZNF571Q7Z3V5 609 aaPredicted RBP9.85□□□□□ -0.83
SNX1-202ENST00000380285 FNIP1Q8TF40 1166 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 TMEM143Q96AN5 459 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 STK39Q9UEW8 545 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 DUSP10Q9Y6W6 482 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 FAM25AB3EWG3 89 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 FAM25CB3EWG5 89 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 FAM25GB3EWG6 89 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 MSH3P20585 1137 aa9.85□□□□□ -0.83
SNX1-202ENST00000380285 GP5P40197 560 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms