RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 ZBTB16Q05516 673 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 PTP4A2Q12974 167 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 TRPC3Q13507 836 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 DENND1BQ6P3S1 775 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 KLHL35Q6PF15 583 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 TSHZ1Q6ZSZ6 1077 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 RDM1Q8NG50 284 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 HSPBAP1Q96EW2 488 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 ABHD8Q96I13 439 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 MAML3Q96JK9 1138 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 AGAP3Q96P47 875 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 TIMMDC1Q9NPL8 285 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 CYTH4Q9UIA0 394 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 SSC5DA1L4H1 1573 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 PHIPQ8WWQ0 1821 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 C19orf81C9J6K1 198 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 PMM2O15305 246 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 STK10O94804 968 aaKnown RBP17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 RAP1GDS1P52306 607 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 LRRC8BQ6P9F7 803 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 KLHDC10Q6PID8 442 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 RASSF3Q86WH2 238 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 RHOT1Q8IXI2 618 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 CEP70Q8NHQ1 597 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 FEZF2Q8TBJ5 459 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 ZNF398Q8TD17 642 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 PRICKLE1Q96MT3 831 aaPredicted RBP17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 CGRRF1Q99675 332 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 IMPG2Q9BZV3 1241 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 SPATC1LQ9H0A9 340 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 CXCL16Q9H2A7 254 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 PPM1HQ9ULR3 514 aa17.97■□□□□ 0.47
LDLRAP1-201ENST00000374338 MCM3APO60318 1980 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 LOXHD1Q8IVV2 1947 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 MSCO60682 206 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 PRKCBP05771 671 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 RFC1P35251 1148 aaPredicted RBP17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 NFX1Q12986 1120 aaKnown RBP17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 SH3PXD2AQ5TCZ1 1133 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 C1orf228Q6PIY5 440 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 OLFML1Q6UWY5 402 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 RAPH1Q70E73 1250 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 OR6Y1Q8NGX8 325 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 TRAIPQ9BWF2 469 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 EFR3BQ9Y2G0 817 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 NFASCO94856 1347 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 EVPLQ92817 2033 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 DKC1O60832 514 aaKnown RBP eCLIP17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 RARBP10826 455 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 ESRRAP11474 423 aaPredicted RBP17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 TBL3Q12788 808 aaKnown RBP17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 GPS1Q13098 491 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 NR1H3Q13133 447 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 FYB2Q5VWT5 728 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 PDSS2Q86YH6 399 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 TREML1Q86YW5 311 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 FAM81BQ96LP2 452 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 TWNKQ96RR1 684 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 RNPEPQ9H4A4 650 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 FAIMQ9NVQ4 179 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 SLC17A7Q9P2U7 560 aa17.96■□□□□ 0.47
LDLRAP1-201ENST00000374338 PORP16435 677 aaPredicted RBP17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 ARSEP51690 589 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 MTTPP55157 894 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 AP2B1P63010 937 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 DNAJC24Q6P3W2 148 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 ZBED8Q8IZ13 594 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 KIAA0319LQ8IZA0 1049 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 UBA3Q8TBC4 463 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 FNDC8Q8TC99 324 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 VTI1AQ96AJ9 217 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 SPATA33Q96N06 139 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 ZDHHC7Q9NXF8 308 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 ADGRA2Q96PE1 1338 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 PRPF4O43172 522 aaKnown RBP eCLIP17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 TMEM191BP0C7N4 346 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 SERPINB8P50452 374 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 KLF1Q13351 362 aaPredicted RBP17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 XRRA1Q6P2D8 792 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 LBX2Q6XYB7 198 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 TMEM174Q8WUU8 243 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 CCDC77Q9BR77 488 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 NRBP2Q9NSY0 501 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 TBCCD1Q9NVR7 557 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 CCDC160A6NGH7 325 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 ARFIP2P53365 341 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 GDF10P55107 478 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 ZNF699Q32M78 642 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 SFT2D3Q587I9 215 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 RIPOR1Q6ZS17 1223 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 PANX3Q96QZ0 392 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 PLVAPQ9BX97 442 aa17.95■□□□□ 0.46
LDLRAP1-201ENST00000374338 HTR3EA5X5Y0 456 aa17.94■□□□□ 0.46
LDLRAP1-201ENST00000374338 SGK1O00141 431 aa17.94■□□□□ 0.46
LDLRAP1-201ENST00000374338 VTNP04004 478 aa17.94■□□□□ 0.46
LDLRAP1-201ENST00000374338 NFICP08651 508 aa17.94■□□□□ 0.46
LDLRAP1-201ENST00000374338 CYP2C8P10632 490 aa17.94■□□□□ 0.46
LDLRAP1-201ENST00000374338 UQCRBP14927 111 aa17.94■□□□□ 0.46
LDLRAP1-201ENST00000374338 ASPHQ12797 758 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms