RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PACSIN2Q9UNF0 486 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 PLXNA3P51805 1871 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 FANCGO15287 622 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 SPOPO43791 374 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 TFE3P19532 575 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 NOS2P35228 1153 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 PLD1Q13393 1074 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 PIGHQ14442 188 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 DUSP6Q16828 381 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 CCDC14Q49A88 953 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 SH3PXD2AQ5TCZ1 1133 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 ZNF697Q5TEC3 545 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 BTBD8Q5XKL5 378 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 ITIH5Q86UX2 942 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 PPP2R3CQ969Q6 453 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 SLC2A13Q96QE2 648 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 DDX23Q9BUQ8 820 aaKnown RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 TTYH1Q9H313 450 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 IGFLR1Q9H665 355 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 TLR8Q9NR97 1041 aaKnown RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 COMMD8Q9NX08 183 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 OSER1Q9NX31 292 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 NUDT5Q9UKK9 219 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 PATJQ8NI35 1801 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 CCL16O15467 120 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 DAB1O75553 588 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 C1RP00736 705 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 SSR1P43307 286 aaKnown RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 PITX1P78337 314 aaPredicted RBP11.45□□□□□ -0.58
BRCC3-204ENST00000369462 NT5DC3Q86UY8 548 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 MYRFLQ96LU7 910 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 ABCC13Q9NSE7 274 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 DPP7Q9UHL4 492 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 AMFRQ9UKV5 643 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 JRKLQ9Y4A0 524 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 ASB3Q9Y575 518 aa11.45□□□□□ -0.58
BRCC3-204ENST00000369462 KIF2AO00139 706 aaPredicted RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 NCK2O43639 380 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 ZMYND10O75800 440 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 RNF8O76064 485 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 DNA2P51530 1060 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 GRIN2CQ14957 1233 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 RAB6CQ53S08 254 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 PRPF38BQ5VTL8 546 aaKnown RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 ELMOD1Q8N336 334 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 ARHGAP18Q8N392 663 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 ADAM32Q8TC27 787 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 RAB6CQ9H0N0 254 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 STAP1Q9ULZ2 295 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 ZNF638Q14966 1978 aaKnown RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 XIRP2A4UGR9 3374 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 SYNJ2BP-COX16A0A087WUM0 186 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 SOX1O00570 391 aaPredicted RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 PTPN9P43378 593 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 SLC25A52Q3SY17 297 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 DNTTIP2Q5QJE6 756 aaKnown RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 CC2D1AQ6P1N0 951 aaPredicted RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 RSRC2Q7L4I2 434 aaKnown RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 ARFGAP1Q8N6T3 406 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 NIPA2Q8N8Q9 360 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 FAM172AQ8WUF8 416 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 TRMT2BQ96GJ1 504 aaKnown RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 TBCBQ99426 244 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 TRIM62Q9BVG3 475 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 ZNF334Q9HCZ1 680 aaPredicted RBP11.44□□□□□ -0.58
BRCC3-204ENST00000369462 COX16Q9P0S2 106 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 LCMT1Q9UIC8 334 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 EYSQ5T1H1 3165 aa11.44□□□□□ -0.58
BRCC3-204ENST00000369462 GREB1Q4ZG55 1949 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 CTAGE9A4FU28 777 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 LRCH4O75427 683 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 TUBB4AP04350 444 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 TCF4P15884 667 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 DESP17661 470 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 CASQ1P31415 396 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 SLC1A1P43005 524 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 PSEN1P49768 467 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 SULT1E1P49888 294 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 TCEAL5Q5H9L2 206 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 MEI1Q5TIA1 1274 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 RTL10Q7L3V2 364 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 RNF139Q8WU17 664 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 NT5C3BQ969T7 300 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 FAM161BQ96MY7 647 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 NPY6RQ99463 290 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 CORO1BQ9BR76 489 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 TLR10Q9BXR5 811 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 NSUN3Q9H649 340 aaKnown RBP11.43□□□□□ -0.58
BRCC3-204ENST00000369462 TRPM5Q9NZQ8 1165 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 UXTQ9UBK9 157 aaPredicted RBP11.43□□□□□ -0.58
BRCC3-204ENST00000369462 M0QYT0 321 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 DPYSL4O14531 572 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 TBX18O95935 607 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 ATP1A1P05023 1023 aaKnown RBP11.43□□□□□ -0.58
BRCC3-204ENST00000369462 ZDHHC11BP0C7U3 371 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 RARGP13631 454 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 MAN1A1P33908 653 aa11.43□□□□□ -0.58
BRCC3-204ENST00000369462 ATXN1P54253 815 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms